RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 FANCEQ9HB96 536 aa16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 HOMER3Q9NSC5 361 aa16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 OR6C2Q9NZP2 312 aa16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 SLC2A6Q9UGQ3 507 aa16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 POLHQ9Y253 713 aa16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 FER1L5A0AVI2 2057 aa16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 UBR5O95071 2799 aaPredicted RBP16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 SLC9B1P1A6NJY1 282 aa16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 BHMG1C9JSJ3 638 aaPredicted RBP16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 KDM1AO60341 852 aa16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 SCRG1O75711 98 aa16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 CDK16Q00536 496 aa16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 SNX1Q13596 522 aa16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 GPR19Q15760 415 aa16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 ZNF789Q5FWF6 425 aa16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 PCID2Q5JVF3 399 aa16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 SPESP1Q6UW49 350 aa16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 TMEM126BQ8IUX1 230 aa16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 APLFQ8IW19 511 aaPredicted RBP16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 SLC22A15Q8IZD6 547 aa16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 MPP5Q8N3R9 675 aa16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 PPHLN1Q8NEY8 458 aaKnown RBP16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 C9orf43Q8TAL5 461 aaPredicted RBP16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 PPM1MQ96MI6 270 aa16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 TRAPPC9Q96Q05 1148 aa16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 TSSK1BQ9BXA7 367 aa16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 IL22Q9GZX6 179 aa16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 TREX1Q9NSU2 369 aa16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 SOHLH2Q9NX45 425 aa16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 ICKQ9UPZ9 632 aa16.56■□□□□ 0.24
MAP1LC3B-208ENST00000570189 GSAPA4D1B5 854 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 OR1I1O60431 355 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 GPC4O75487 556 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 FGGP02679 453 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 ST6GAL1P15907 406 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 TPSB2P20231 275 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 PTPN4P29074 926 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 RORAP35398 523 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 ARCN1P48444 511 aaKnown RBP16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 TTPAP49638 278 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 PRAMEP78395 509 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 CCZ1BP86790 482 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 CCZ1P86791 482 aaPredicted RBP16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 TPSAB1Q15661 275 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 DEFB109BQ30KR1 87 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 FASTKD1Q53R41 847 aaKnown RBP16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 DNAJC21Q5F1R6 531 aaKnown RBP16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 SYVN1Q86TM6 617 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 DSELQ8IZU8 1212 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 PHC3Q8NDX5 983 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 OR5AR1Q8NGP9 310 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 CPT1BQ92523 772 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 DPH2Q9BQC3 489 aaPredicted RBP16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 HGH1Q9BTY7 390 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 ACTL8Q9H568 366 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 MRM3Q9HC36 420 aaKnown RBP16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 LZTFL1Q9NQ48 299 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 ACTR10Q9NZ32 417 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 CDYLQ9Y232 598 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 ASF1AQ9Y294 204 aa16.55■□□□□ 0.24
MAP1LC3B-208ENST00000570189 CCDC78A2IDD5 438 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 MAP3K7O43318 606 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 WISP1O95388 367 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 NTRK1P04629 796 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 FURINP09958 794 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 RAB40ALP0C0E4 278 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 TPBGLP0DKB5 382 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 MAGEA6P43360 314 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 NPY2RP49146 381 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 CSRP3P50461 194 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 PMS2P54278 862 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 ABRQ12979 859 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 GPS2Q13227 327 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 UGT8Q16880 541 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 ATP1A1-AS1Q5TC04 95 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 C16orf46Q6P387 395 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 PRICKLE2Q7Z3G6 844 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 PRUNE1Q86TP1 453 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 SLC38A9Q8NBW4 561 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 FLVCR1-AS1Q8TAF5 88 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 ASZ1Q8WWH4 475 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 THAP4Q8WY91 577 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 AP1M1Q9BXS5 423 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 AKIRIN1Q9H9L7 192 aaPredicted RBP16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 ANAPC2Q9UJX6 822 aa16.54■□□□□ 0.24
MAP1LC3B-208ENST00000570189 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.53■□□□□ 0.24
MAP1LC3B-208ENST00000570189 PIPSLA2A3N6 862 aa16.53■□□□□ 0.24
MAP1LC3B-208ENST00000570189 H3BMH7 237 aa16.53■□□□□ 0.24
MAP1LC3B-208ENST00000570189 PRMT5O14744 637 aaPredicted RBP16.53■□□□□ 0.24
MAP1LC3B-208ENST00000570189 SLCO2B1O94956 709 aa16.53■□□□□ 0.24
MAP1LC3B-208ENST00000570189 KLK3P07288 261 aaPredicted RBP16.53■□□□□ 0.24
MAP1LC3B-208ENST00000570189 HBQ1P09105 142 aa16.53■□□□□ 0.24
MAP1LC3B-208ENST00000570189 ZSCAN5DPP0CG00 497 aa16.53■□□□□ 0.24
MAP1LC3B-208ENST00000570189 RPS3P23396 243 aaKnown RBP eCLIP16.53■□□□□ 0.248e-13■■■■■ 32.9
MAP1LC3B-208ENST00000570189 RPS15P62841 145 aaKnown RBP16.53■□□□□ 0.24
MAP1LC3B-208ENST00000570189 PRKG2Q13237 762 aa16.53■□□□□ 0.24
MAP1LC3B-208ENST00000570189 ERV3-1Q14264 604 aa16.53■□□□□ 0.24
MAP1LC3B-208ENST00000570189 SEMA3AQ14563 771 aa16.53■□□□□ 0.24
MAP1LC3B-208ENST00000570189 SLC5A12Q1EHB4 618 aa16.53■□□□□ 0.24
MAP1LC3B-208ENST00000570189 SYTL3Q4VX76 610 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms