RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 GCGRP47871 477 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 GABRA4P48169 554 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 CARSP49589 748 aaKnown RBP6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 RAB28P51157 221 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 RENBPP51606 427 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 SRSF2Q01130 221 aaKnown RBP6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 GCNT1Q02742 428 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 GALNT3Q14435 633 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 ATP13A4Q4VNC1 1196 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 RNFT1Q5M7Z0 435 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 FKBP15Q5T1M5 1219 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 COX15Q7KZN9 410 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 GALNTL5Q7Z4T8 443 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 ADGRG6Q86SQ4 1221 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 SLC13A5Q86YT5 568 aaPredicted RBP6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 ZNF547Q8IVP9 402 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 LGI4Q8N135 537 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 ZNF655Q8N720 491 aaPredicted RBP6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 OR5M3Q8NGP4 307 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 OR10Q1Q8NGQ4 319 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 PIH1D2Q8WWB5 315 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 N4BP2L2Q92802 583 aaPredicted RBP6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 PSKH2Q96QS6 385 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 MESP1Q9BRJ9 268 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 HES7Q9BYE0 225 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 MAGEB5Q9BZ81 275 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 CHRNA10Q9GZZ6 450 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 SOX17Q9H6I2 414 aaPredicted RBP6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 LRRC19Q9H756 370 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 KLHL1Q9NR64 748 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 TRIM10Q9UDY6 481 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 Q9UFV3 132 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 TEKT2Q9UIF3 430 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 FOXD3Q9UJU5 478 aaPredicted RBP6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 TUBAL3A6NHL2 446 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 PMM2O15305 246 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 ACTN4O43707 911 aaKnown RBP6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 SLC25A14O95258 325 aaPredicted RBP6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 PGLSO95336 258 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 CELA2AP08217 269 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 EPB41P11171 864 aaKnown RBP6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 ITGAMP11215 1152 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 MTHFD1P11586 935 aaKnown RBP6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 CTPS1P17812 591 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 VCLP18206 1134 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 EPHB2P29323 1055 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 GNA15P30679 374 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 FLT3P36888 993 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 ZNF33BQ06732 778 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 TRAF2Q12933 501 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 FBXL19-AS1Q494R0 122 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 PTPN20Q4JDL3 420 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 TFDP3Q5H9I0 405 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 DCAF17Q5H9S7 520 aaPredicted RBP6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 ZNF648Q5T619 568 aaPredicted RBP6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 GPRC6AQ5T6X5 926 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 TCERG1LQ5VWI1 586 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 TRNP1Q6NT89 227 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 TTI2Q6NXR4 508 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 CNSTQ6PJW8 725 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 SHISA6Q6ZSJ9 500 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 NEK10Q6ZWH5 1172 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 RRAGAQ7L523 313 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 WDR53Q7Z5U6 358 aaPredicted RBP6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 NDUFAF2Q8N183 169 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 LIX1Q8N485 282 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 PPP1R14CQ8TAE6 165 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 SLC20A1Q8WUM9 679 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 SMPDL3BQ92485 455 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 RNASE6Q93091 150 aaKnown RBP6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 C8orf44Q96CB5 159 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 LRRC46Q96FV0 321 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 CFAP57Q96MR6 1250 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 OLFM1Q99784 485 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 SH3GL2Q99962 352 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 TTYH2Q9BSA4 534 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 CRB3Q9BUF7 120 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 FAM83DQ9H4H8 585 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 KIR3DX1Q9H7L2 352 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 FAM60AQ9NP50 221 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 PLSCR2Q9NRY7 297 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 EXOC1Q9NV70 894 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 B4GALT7Q9UBV7 327 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 SLC24A2Q9UI40 661 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 DNPEPQ9ULA0 475 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 PCDHGC3Q9UN70 934 aa6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 EPPK1P58107 5090 aaKnown RBP6.3□□□□□ -1.4
HERPUD1-217ENST00000569429 IGHV1-45A0A0A0MS14 117 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 A0A0J9YYE9 177 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 A0A1B0GX78 115 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 RGSL1A5PLK6 1076 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 GOLGA8SH3BPF8 625 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 HCRTR1O43613 425 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 TRBC1P01850 177 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 STATHP02808 62 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 CYP1A1P04798 512 aaPredicted RBP6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 GLI4P10075 376 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 ICAM2P13598 275 aa6.29□□□□□ -1.4
HERPUD1-217ENST00000569429 PAX1P15863 534 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms