RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 P4HTMQ9NXG6 502 aa14.98□□□□□ -0.01
PALB2-205ENST00000567003 ACTR10Q9NZ32 417 aa14.98□□□□□ -0.01
PALB2-205ENST00000567003 DHCR7Q9UBM7 475 aaKnown RBP14.98□□□□□ -0.01
PALB2-205ENST00000567003 RSPH14Q9UHP6 348 aa14.98□□□□□ -0.01
PALB2-205ENST00000567003 GPN3Q9UHW5 284 aaPredicted RBP14.98□□□□□ -0.01
PALB2-205ENST00000567003 CRLS1Q9UJA2 301 aa14.98□□□□□ -0.01
PALB2-205ENST00000567003 HEBP2Q9Y5Z4 205 aa14.98□□□□□ -0.01
PALB2-205ENST00000567003 POLQO75417 2590 aa14.98□□□□□ -0.01
PALB2-205ENST00000567003 FBN2P35556 2912 aa14.98□□□□□ -0.01
PALB2-205ENST00000567003 CSMD2Q7Z408 3487 aa14.98□□□□□ -0.01
PALB2-205ENST00000567003 GOLGA6L22H0YM25 854 aa14.97□□□□□ -0.01
PALB2-205ENST00000567003 H3BMH7 237 aa14.97□□□□□ -0.01
PALB2-205ENST00000567003 MATN2O00339 956 aa14.97□□□□□ -0.01
PALB2-205ENST00000567003 PEX12O00623 359 aa14.97□□□□□ -0.01
PALB2-205ENST00000567003 ALPPP05187 535 aa14.97□□□□□ -0.01
PALB2-205ENST00000567003 MSL3P1P0C860 447 aa14.97□□□□□ -0.01
PALB2-205ENST00000567003 FOLR3P41439 243 aa14.97□□□□□ -0.01
PALB2-205ENST00000567003 XIAPP98170 497 aa14.97□□□□□ -0.01
PALB2-205ENST00000567003 MPP3Q13368 585 aa14.97□□□□□ -0.01
PALB2-205ENST00000567003 SSPNQ14714 243 aa14.97□□□□□ -0.01
PALB2-205ENST00000567003 HIF1AQ16665 826 aa14.97□□□□□ -0.01
PALB2-205ENST00000567003 ASTE1Q2TB18 679 aaPredicted RBP14.97□□□□□ -0.01
PALB2-205ENST00000567003 CAVIN1Q6NZI2 390 aaKnown RBP14.97□□□□□ -0.01
PALB2-205ENST00000567003 IGFL3Q6UXB1 125 aa14.97□□□□□ -0.01
PALB2-205ENST00000567003 Q6ZS92 163 aa14.97□□□□□ -0.01
PALB2-205ENST00000567003 C19orf47Q8N9M1 422 aaKnown RBP14.97□□□□□ -0.01
PALB2-205ENST00000567003 UBE2Q2Q8WVN8 375 aa14.97□□□□□ -0.01
PALB2-205ENST00000567003 DCUN1D1Q96GG9 259 aa14.97□□□□□ -0.01
PALB2-205ENST00000567003 MS4A3Q96HJ5 214 aa14.97□□□□□ -0.01
PALB2-205ENST00000567003 FER1L6-AS2Q96M78 137 aa14.97□□□□□ -0.01
PALB2-205ENST00000567003 GBP5Q96PP8 586 aa14.97□□□□□ -0.01
PALB2-205ENST00000567003 DPH2Q9BQC3 489 aaPredicted RBP14.97□□□□□ -0.01
PALB2-205ENST00000567003 CCM2Q9BSQ5 444 aa14.97□□□□□ -0.01
PALB2-205ENST00000567003 DHRS4Q9BTZ2 278 aa14.97□□□□□ -0.01
PALB2-205ENST00000567003 FSD1LQ9BXM9 530 aa14.97□□□□□ -0.01
PALB2-205ENST00000567003 SRPK3Q9UPE1 567 aa14.97□□□□□ -0.01
PALB2-205ENST00000567003 ICKQ9UPZ9 632 aa14.97□□□□□ -0.01
PALB2-205ENST00000567003 C2orf74A8MZ97 194 aa14.96□□□□□ -0.01
PALB2-205ENST00000567003 E2F3O00716 465 aa14.96□□□□□ -0.01
PALB2-205ENST00000567003 OR2B3O76000 313 aa14.96□□□□□ -0.01
PALB2-205ENST00000567003 UMODP07911 640 aa14.96□□□□□ -0.01
PALB2-205ENST00000567003 HBQ1P09105 142 aa14.96□□□□□ -0.01
PALB2-205ENST00000567003 PRSS56P0CW18 603 aa14.96□□□□□ -0.01
PALB2-205ENST00000567003 POU3F2P20265 443 aaPredicted RBP14.96□□□□□ -0.01
PALB2-205ENST00000567003 HADHAP40939 763 aa14.96□□□□□ -0.01
PALB2-205ENST00000567003 NR2C2P49116 596 aa14.96□□□□□ -0.01
PALB2-205ENST00000567003 CDKN1CP49918 316 aaPredicted RBP14.96□□□□□ -0.01
PALB2-205ENST00000567003 TAF1AQ15573 450 aaPredicted RBP14.96□□□□□ -0.01
PALB2-205ENST00000567003 TAZQ16635 292 aa14.96□□□□□ -0.01
PALB2-205ENST00000567003 LRRC38Q5VT99 294 aa14.96□□□□□ -0.01
PALB2-205ENST00000567003 SPESP1Q6UW49 350 aa14.96□□□□□ -0.01
PALB2-205ENST00000567003 AMIGO1Q86WK6 493 aa14.96□□□□□ -0.01
PALB2-205ENST00000567003 GPR135Q8IZ08 494 aa14.96□□□□□ -0.01
PALB2-205ENST00000567003 ZADH2Q8N4Q0 377 aa14.96□□□□□ -0.01
PALB2-205ENST00000567003 ZNF655Q8N720 491 aaPredicted RBP14.96□□□□□ -0.01
PALB2-205ENST00000567003 N4BP2L2Q92802 583 aaPredicted RBP14.96□□□□□ -0.01
PALB2-205ENST00000567003 MARVELD3Q96A59 401 aa14.96□□□□□ -0.01
PALB2-205ENST00000567003 QKIQ96PU8 341 aaKnown RBP eCLIP14.96□□□□□ -0.01
PALB2-205ENST00000567003 BARD1Q99728 777 aaKnown RBP14.96□□□□□ -0.01
PALB2-205ENST00000567003 TFB2MQ9H5Q4 396 aaKnown RBP14.96□□□□□ -0.01
PALB2-205ENST00000567003 SPTLC3Q9NUV7 552 aa14.96□□□□□ -0.01
PALB2-205ENST00000567003 DDX56Q9NY93 547 aaKnown RBP14.96□□□□□ -0.01
PALB2-205ENST00000567003 SPHK1Q9NYA1 384 aa14.96□□□□□ -0.01
PALB2-205ENST00000567003 IFNKQ9P0W0 207 aa14.96□□□□□ -0.01
PALB2-205ENST00000567003 IFT80Q9P2H3 777 aaPredicted RBP14.96□□□□□ -0.01
PALB2-205ENST00000567003 NDOR1Q9UHB4 597 aa14.96□□□□□ -0.01
PALB2-205ENST00000567003 OSGIN2Q9Y236 505 aa14.96□□□□□ -0.01
PALB2-205ENST00000567003 LRRTM2O43300 516 aa14.95□□□□□ -0.02
PALB2-205ENST00000567003 MAP3K7O43318 606 aa14.95□□□□□ -0.02
PALB2-205ENST00000567003 UGT2B7P16662 529 aa14.95□□□□□ -0.02
PALB2-205ENST00000567003 COMTP21964 271 aa14.95□□□□□ -0.02
PALB2-205ENST00000567003 ARHGAP25P42331 645 aa14.95□□□□□ -0.02
PALB2-205ENST00000567003 GABRA4P48169 554 aa14.95□□□□□ -0.02
PALB2-205ENST00000567003 BOP1Q14137 746 aaKnown RBP14.95□□□□□ -0.02
PALB2-205ENST00000567003 TFDP2Q14188 446 aa14.95□□□□□ -0.02
PALB2-205ENST00000567003 ZNF658BQ4V348 819 aaPredicted RBP14.95□□□□□ -0.02
PALB2-205ENST00000567003 RHBDD2Q6NTF9 364 aa14.95□□□□□ -0.02
PALB2-205ENST00000567003 SARM1Q6SZW1 724 aa14.95□□□□□ -0.02
PALB2-205ENST00000567003 NXPE1Q8N323 547 aa14.95□□□□□ -0.02
PALB2-205ENST00000567003 ST6GALNAC3Q8NDV1 305 aa14.95□□□□□ -0.02
PALB2-205ENST00000567003 OR2Y1Q8NGV0 311 aa14.95□□□□□ -0.02
PALB2-205ENST00000567003 IP6K3Q96PC2 410 aa14.95□□□□□ -0.02
PALB2-205ENST00000567003 GOLPH3Q9H4A6 298 aa14.95□□□□□ -0.02
PALB2-205ENST00000567003 NOVA2Q9UNW9 492 aaKnown RBP14.95□□□□□ -0.02
PALB2-205ENST00000567003 CELSR1Q9NYQ6 3014 aa14.95□□□□□ -0.02
PALB2-205ENST00000567003 C2CD3Q4AC94 2353 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 KLHL33A6NCF5 533 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 C2orf81A6NN90 581 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 IFRD1O00458 451 aaPredicted RBP14.94□□□□□ -0.02
PALB2-205ENST00000567003 SPOPO43791 374 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 AKR1B10O60218 316 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 PYGMP11217 842 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 RALBP11234 206 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 ATP1B2P14415 290 aaPredicted RBP14.94□□□□□ -0.02
PALB2-205ENST00000567003 ITGA3P26006 1051 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 MARCKSL1P49006 195 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 ZNF140P52738 457 aaPredicted RBP14.94□□□□□ -0.02
PALB2-205ENST00000567003 DCDP81605 110 aaKnown RBP14.94□□□□□ -0.02
PALB2-205ENST00000567003 CYP2A13Q16696 494 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 BZW1Q7L1Q6 419 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms