RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 CLIP4Q8N3C7 705 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 TMEM145Q8NBT3 493 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 PIK3R3Q92569 461 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 SLC25A36Q96CQ1 311 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 ZSWIM3Q96MP5 696 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 C7orf26Q96N11 449 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 GPATCH1Q9BRR8 931 aaKnown RBP13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 TVP23BQ9NYZ1 205 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 PCDHGC3Q9UN70 934 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 PCDHGA11Q9Y5H2 935 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 SIGLEC1Q9BZZ2 1709 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 A8MUI8 341 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 LMO2P25791 158 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 NSG1P42857 185 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 BLKP51451 505 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 IFI44LQ53G44 452 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 ARMC10Q8N2F6 343 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 CNTD1Q8N815 330 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 ZNF781Q8N8C0 355 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 GAL3ST3Q96A11 431 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 TAF1AQ15573 450 aaPredicted RBP13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 C2orf27AQ580R0 203 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 PPP2R2DQ66LE6 453 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 ALG1LQ6GMV1 187 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 TNFAIP8L2Q6P589 184 aaPredicted RBP13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 KCTD8Q6ZWB6 473 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 CYP2U1Q7Z449 544 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 ZNF615Q8N8J6 731 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 FAM13CQ8NE31 585 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 BRSK1Q8TDC3 778 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 LENG8Q96PV6 779 aaPredicted RBP13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 ELAC1Q9H777 363 aaKnown RBP13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 TCF7L1Q9HCS4 588 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 ADAP2Q9NPF8 381 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 C1orf109Q9NX04 203 aa13.39□□□□□ -0.27
CX3CL1-204ENST00000565912 TMEM150CB9EJG8 249 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 CXCR6O00574 342 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 CBFA2T3O75081 653 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 GNSP15586 552 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 NCBP2P52298 156 aaKnown RBP eCLIP13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 NRLP54845 237 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 ZFP69Q49AA0 526 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 LBX2Q6XYB7 198 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 QSOX2Q6ZRP7 698 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 AMZ2Q86W34 360 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 AMIGO1Q86WK6 493 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 LRTOMTQ8WZ04 291 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 B3GALT6Q96L58 329 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 MTERF1Q99551 399 aaKnown RBP13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 MGME1Q9BQP7 344 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 KCND1Q9NSA2 647 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 ATXN10Q9UBB4 475 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 A8MUA0 341 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 WNT7AO00755 349 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 PPP1R11O60927 126 aaPredicted RBP13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 GNAZP19086 355 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 ACTR1BP42025 376 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 ACTR1AP61163 376 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 RASGEF1BQ0VAM2 473 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 ADGRD1Q6QNK2 874 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 OR6K6Q8NGW6 343 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 NSMCE3Q96MG7 304 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 FAM129BQ96TA1 746 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 CACNG4Q9UBN1 327 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 CORO1CQ9ULV4 474 aaPredicted RBP13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 PMF1-BGLAPU3KQ54 211 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 E7ENX8 843 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 SERPINA3P01011 423 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 APOC1P02654 83 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 ALPPP05187 535 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 ENPP7Q6UWV6 458 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 CAPNS2Q96L46 248 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 FEM1AQ9BSK4 669 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 FZD10Q9ULW2 581 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 AIREO43918 545 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 OR1I1O60431 355 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 CD2P06729 351 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 DGKEP52429 567 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 DAOAP59103 153 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 RPS14P62263 151 aaKnown RBP13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 RPP38P78345 283 aaKnown RBP13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 MAPK14Q16539 360 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 TNFAIP8L3Q5GJ75 292 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 CAND1Q86VP6 1230 aaKnown RBP13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 UBE2J2Q8N2K1 259 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 SPOCK2Q92563 424 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 UNC93B1Q9H1C4 597 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 SP140LQ9H930 580 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 FBXW11Q9UKB1 542 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 REXO2Q9Y3B8 237 aaKnown RBP13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 ARL5AQ9Y689 179 aa13.38□□□□□ -0.27
CX3CL1-204ENST00000565912 CPED1A4D0V7 1026 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 PI15O43692 258 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 USP2O75604 605 aaPredicted RBP13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 PRKCGP05129 697 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 ZNF8P17098 575 aaPredicted RBP13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 TARDBPQ13148 414 aaKnown RBP eCLIP13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 LRRC32Q14392 662 aa13.37□□□□□ -0.27
CX3CL1-204ENST00000565912 FAM174BQ3ZCQ3 159 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms