RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 GPR150Q8NGU9 434 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 BRSK1Q8TDC3 778 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 CALR3Q96L12 384 aaKnown RBP8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 PPM1MQ96MI6 270 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 POLR1EQ9GZS1 481 aaKnown RBP8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 NT5MQ9NPB1 228 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 TXLNGQ9NUQ3 528 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 IMP3Q9NV31 184 aaKnown RBP8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 HAUS2Q9NVX0 235 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 COQ3Q9NZJ6 369 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 KCNN3Q9UGI6 736 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 LCMT1Q9UIC8 334 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 TINAGQ9UJW2 476 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 PSMD13Q9UNM6 376 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 CDYLQ9Y232 598 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 MRPS2Q9Y399 296 aaKnown RBP8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 DNMT3AQ9Y6K1 912 aaPredicted RBP8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 COLEC10Q9Y6Z7 277 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 A0A087X0T9 212 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 FAM171A2A8MVW0 826 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 ANKRD66B4E2M5 251 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 SOCS6O14544 535 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 ATMINO43313 823 aaPredicted RBP8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 PRPSAP2O60256 369 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 PRAMEF2O60811 474 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 ALOX12BO75342 701 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 POP7O75817 140 aaKnown RBP8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 ZWINTO95229 277 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 IPO7O95373 1038 aaKnown RBP8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 H2AFZP0C0S5 128 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 FAM228BP0C875 321 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 MTHFD1P11586 935 aaKnown RBP8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 ITGAXP20702 1163 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 ADAM8P78325 824 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 DMPKQ09013 629 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 SPA17Q15506 151 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 CEBPEQ15744 281 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 TUBB8Q3ZCM7 444 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 PPP6R3Q5H9R7 873 aaPredicted RBP8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 DCUN1D2Q6PH85 259 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 KIRREL2Q6UWL6 708 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 CLEC9AQ6UXN8 241 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 Q6ZPB1 254 aaPredicted RBP8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 H2AFVQ71UI9 128 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 C11orf96Q7Z7L8 435 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 HOOK3Q86VS8 718 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 CCDC110Q8TBZ0 833 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 NRGNQ92686 78 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 SDCCAG3Q96C92 435 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 C18orf12Q96KH6 178 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 CHP1Q99653 195 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 BAG1Q99933 345 aaPredicted RBP8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 NUP85Q9BW27 656 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 ZFYVE1Q9HBF4 777 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 MRM3Q9HC36 420 aaKnown RBP8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 PLA2G3Q9NZ20 509 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 STMN3Q9NZ72 180 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 DTLQ9NZJ0 730 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 SLC24A2Q9UI40 661 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 POMT2Q9UKY4 750 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 ZNF835Q9Y2P0 537 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 EPN1Q9Y6I3 576 aaPredicted RBP8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 SCINQ9Y6U3 715 aa8.73□□□□□ -1.01
VPS9D1-205ENST00000565452 RTTNQ86VV8 2226 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 C17orf113A0A1B0GUU1 675 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 CNOT3O75175 753 aaKnown RBP8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 MTX2O75431 263 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 USP1O94782 785 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 PRLP01236 227 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 ALBP02768 609 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 ST6GAL1P15907 406 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 HLA-DPA1P20036 260 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 ALAS2P22557 587 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 NDUFS1P28331 727 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 LMAN1P49257 510 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 SLC9A5Q14940 896 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 CA9Q16790 459 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 ALS2CLQ60I27 953 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 METRNLQ641Q3 311 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 DNAJC24Q6P3W2 148 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 TLDC1Q6P9B6 456 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 TMCO3Q6UWJ1 677 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 CDHR3Q6ZTQ4 885 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 OVCH1Q7RTY7 1134 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 LRRC49Q8IUZ0 686 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 PSTKQ8IV42 348 aaKnown RBP8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 KBTBD2Q8IY47 623 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 ATPAF2Q8N5M1 289 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 TEX26Q8N6G2 289 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 SPC24Q8NBT2 197 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 GPR26Q8NDV2 337 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 LPCAT1Q8NF37 534 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 GDAP1Q8TB36 358 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 THAP3Q8WTV1 239 aaPredicted RBP8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 PHF10Q8WUB8 498 aaKnown RBP8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 ARSGQ96EG1 525 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 KCTD15Q96SI1 283 aaPredicted RBP8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 INSM2Q96T92 566 aaPredicted RBP8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 ADGRE3Q9BY15 652 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms