RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 CAMK1GQ96NX5 476 aa10.85□□□□□ -0.67
SF3B3-205ENST00000564899 OR2M4Q96R27 311 aa10.85□□□□□ -0.67
SF3B3-205ENST00000564899 TIMM29Q9BSF4 260 aa10.85□□□□□ -0.67
SF3B3-205ENST00000564899 CYP4F12Q9HCS2 524 aa10.85□□□□□ -0.67
SF3B3-205ENST00000564899 GPR27Q9NS67 375 aa10.85□□□□□ -0.67
SF3B3-205ENST00000564899 TM7SF3Q9NS93 570 aa10.85□□□□□ -0.67
SF3B3-205ENST00000564899 GULP1Q9UBP9 304 aa10.85□□□□□ -0.67
SF3B3-205ENST00000564899 SLC23A2Q9UGH3 650 aa10.85□□□□□ -0.67
SF3B3-205ENST00000564899 RNF112Q9ULX5 631 aa10.85□□□□□ -0.67
SF3B3-205ENST00000564899 CDYLQ9Y232 598 aa10.85□□□□□ -0.67
SF3B3-205ENST00000564899 DNAJC16Q9Y2G8 782 aa10.85□□□□□ -0.67
SF3B3-205ENST00000564899 A0A1W2PR77 199 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 CCDC189A1A4V9 331 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 KLHL33A6NCF5 533 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 CYSRT1A8MQ03 144 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 H3BM21 787 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 SCAMP1O15126 338 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 SLCO2B1O94956 709 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 FUCA1P04066 466 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 BPGMP07738 259 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 SBK3P0C264 359 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 NEFHP12036 1026 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 TAC1P20366 129 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 ITPKAP23677 461 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 CD38P28907 300 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 PLOD1Q02809 727 aaPredicted RBP10.84□□□□□ -0.67
SF3B3-205ENST00000564899 DMPKQ09013 629 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 RPA4Q13156 261 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 PCLAFQ15004 111 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 ALG11Q2TAA5 492 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 LYSMD4Q5XG99 296 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 TTC19Q6DKK2 380 aaPredicted RBP10.84□□□□□ -0.67
SF3B3-205ENST00000564899 ZYG11AQ6WRX3 759 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 CYHR1Q6ZMK1 362 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 FAM83HQ6ZRV2 1179 aaPredicted RBP10.84□□□□□ -0.67
SF3B3-205ENST00000564899 NEK10Q6ZWH5 1172 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 FRA10AC1Q70Z53 315 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 CHST15Q7LFX5 561 aaPredicted RBP10.84□□□□□ -0.67
SF3B3-205ENST00000564899 RD3Q7Z3Z2 195 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 MARCH9Q86YJ5 346 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 HID1Q8IV36 788 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 SLC22A15Q8IZD6 547 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 TMEM151AQ8N4L1 468 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 MFSD2AQ8NA29 543 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 STAG3L4Q8TBR4 150 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 DNASE2BQ8WZ79 361 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 TSACCQ96A04 125 aaPredicted RBP10.84□□□□□ -0.67
SF3B3-205ENST00000564899 MECRQ9BV79 373 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 CAPS2Q9BXY5 557 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 TM9SF3Q9HD45 589 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 KLC4Q9NSK0 619 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 COPG2Q9UBF2 871 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 KCNK6Q9Y257 313 aa10.84□□□□□ -0.67
SF3B3-205ENST00000564899 SPTY2D1-AS1A0A0U1RR47 76 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 SYCE1LA8MT33 242 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 SUPT3HB4E1H0 165 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 TARM1B6A8C7 271 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 G3V2L1 256 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 TLR4O00206 839 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 BIRC5O15392 142 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 KCNJ13O60928 360 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 SMIM24O75264 130 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 SUPT3HO75486 399 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 RASGRP1O95267 797 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 TNFP01375 233 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 WNT1P04628 370 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 C8GP07360 202 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 ATP5F1P24539 256 aaPredicted RBP10.83□□□□□ -0.68
SF3B3-205ENST00000564899 PDHA2P29803 388 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 ALDH3A1P30838 453 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 KCNC1P48547 511 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 GNGT1P63211 74 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 OVGP1Q12889 678 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 EIF2B5Q13144 721 aaKnown RBP10.83□□□□□ -0.68
SF3B3-205ENST00000564899 SP140Q13342 867 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 FZD2Q14332 565 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 LAYNQ6UX15 382 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 XKR5Q6UX68 686 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 IQCHQ86VS3 1027 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 PARGQ86W56 976 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 GPSM1Q86YR5 675 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 DCP2Q8IU60 420 aaKnown RBP10.83□□□□□ -0.68
SF3B3-205ENST00000564899 NUDCD3Q8IVD9 361 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 C10orf107Q8IVU9 208 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 CKAP2Q8WWK9 683 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 SREK1Q8WXA9 508 aaKnown RBP10.83□□□□□ -0.68
SF3B3-205ENST00000564899 FOPNLQ96NB1 174 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 ATOH8Q96SQ7 321 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 DPEP2Q9H4A9 486 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 OSGEPL1Q9H4B0 414 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 ADAMTS6Q9UKP5 1117 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 PLEKHM1Q9Y4G2 1056 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 DGKBQ9Y6T7 804 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 PLXND1Q9Y4D7 1925 aa10.83□□□□□ -0.68
SF3B3-205ENST00000564899 DOCK9Q9BZ29 2069 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 FAM221BA6H8Z2 402 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 PABPN1LA6NDY0 278 aaKnown RBP10.82□□□□□ -0.68
SF3B3-205ENST00000564899 NEMP2A6NFY4 417 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 A8MT66 165 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 UBXN8O00124 270 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms