RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 PSAPL1Q6NUJ1 521 aa20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 SCD5Q86SK9 330 aa20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 LYSMD2Q8IV50 215 aa20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 SLC13A3Q8WWT9 602 aa20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 MYEOVQ96EZ4 313 aa20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 SLIRPQ9GZT3 109 aaKnown RBP20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ARNT2Q9HBZ2 717 aa20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ABI2Q9NYB9 513 aaPredicted RBP20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ABCG2Q9UNQ0 655 aa20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 FZD9O00144 591 aa20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 RPP40O75818 363 aaKnown RBP20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ITGB1P05556 798 aa20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 THP07101 528 aa20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 NAT1P18440 290 aa20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 NUDT6P53370 316 aa20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 PRSS36Q5K4E3 855 aa20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 SMYD5Q6GMV2 418 aa20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ZNF548Q8NEK5 533 aaPredicted RBP20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ROGDIQ9GZN7 287 aa20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 SCN4AP35499 1836 aa20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 E5RI56 91 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 VPS4BO75351 444 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 CYP7B1O75881 506 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 HSMCR30P0CW71 290 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 HSPA7P48741 367 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ZNF235Q14590 738 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 KLHDC8BQ8IXV7 354 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 RHEBL1Q8TAI7 183 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 RPRD1AQ96P16 312 aaPredicted RBP20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 SYTL2Q9HCH5 934 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ZIM2Q9NZV7 527 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 TMEM98Q9Y2Y6 226 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 SNX8Q9Y5X2 465 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 A0A0G2JLL6 359 aaPredicted RBP20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 H0Y626 953 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 CREG1O75629 220 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 RFPL2O75678 378 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 TRIM16O95361 564 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 CA8P35219 290 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 MLLT6P55198 1093 aaPredicted RBP20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 RACK1P63244 317 aaKnown RBP20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 PRRT2Q7Z6L0 340 aaPredicted RBP20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ADHFE1Q8IWW8 467 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 RHOXF1Q8NHV9 184 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 PROX1Q92786 737 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 VMP1Q96GC9 406 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ZNF300Q96RE9 604 aaPredicted RBP20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 MROH8Q9H579 483 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 GOLGA4Q13439 2230 aaKnown RBP20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 E2F3O00716 465 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 S100A1P23297 94 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 CLK3P49761 638 aaKnown RBP20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 BTBD2Q9BX70 525 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 RMND5AQ9H871 391 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 QPCTLQ9NXS2 382 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 NEUROG3Q9Y4Z2 214 aa20.11■□□□□ 0.81
MAP1LC3B-206ENST00000564844 AP3D1O14617 1153 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 GUCY1B2O75343 617 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 VIPP01282 170 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 GBX1Q14549 363 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 VTCN1Q7Z7D3 282 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 OR52E6Q96RD3 313 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 NEK6Q9HC98 313 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 SCN3BQ9NY72 215 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 KLHL3Q9UH77 587 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 TRMT6Q9UJA5 497 aaKnown RBP20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ITGB1BP2Q9UKP3 347 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 CDH9Q9ULB4 789 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 A0A0D9SEW6 157 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 M0R129 80 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 SEC22BO75396 215 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 CCNKO75909 580 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 LIPAP38571 399 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 PPP5CP53041 499 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 RGMBQ6NW40 437 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 MSRB3Q8IXL7 192 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 LIX1Q8N485 282 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ATG16L2Q8NAA4 619 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 C17orf50Q8WW18 174 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 GTF2H4Q92759 462 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 FAM120BQ96EK7 910 aaKnown RBP20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ATP13A1Q9HD20 1204 aa20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 EIF3LQ9Y262 564 aaKnown RBP20.1■□□□□ 0.81
MAP1LC3B-206ENST00000564844 PDCD11Q14690 1871 aaKnown RBP20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 OR1E1P30953 314 aa20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 MANEALQ5VSG8 457 aa20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ZDHHC21Q8IVQ6 265 aa20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 BTN2A3PQ96KV6 586 aa20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 INPP5KQ9BT40 448 aa20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 DPY30Q9C005 99 aa20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 CEP44Q9C0F1 390 aa20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 NSUN3Q9H649 340 aaKnown RBP20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 IPPKQ9H8X2 491 aa20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 TRMT13Q9NUP7 481 aaKnown RBP20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 FKBPLQ9UIM3 349 aa20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 AGO1Q9UL18 857 aaKnown RBP20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 PCDHGC4Q9Y5F7 938 aa20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 PER2O15055 1255 aa20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ABCB1P08183 1280 aaPredicted RBP20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 SLC26A3P40879 764 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms