RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 ITGA1P56199 1179 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 GPS2Q13227 327 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 DBN1Q16643 649 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 C4orf22Q6V702 233 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 TMEM139Q8IV31 216 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 PIANPQ8IYJ0 282 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 ADGRF3Q8IZF5 1079 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 DNAAF3Q8N9W5 541 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 NAT14Q8WUY8 206 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 CLIP3Q96DZ5 547 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 TRAPPC9Q96Q05 1148 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 RANBP9Q96S59 729 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 DHRS4Q9BTZ2 278 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 TSSK1BQ9BXA7 367 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 TSGA10Q9BZW7 698 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 CHST8Q9H2A9 424 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 ACTR5Q9H9F9 607 aaPredicted RBP11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 MLXIPLQ9NP71 852 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 ACTR10Q9NZ32 417 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 R3HDM2Q9Y2K5 976 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 PIKFYVEQ9Y2I7 2098 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 SLC5A10A0PJK1 596 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 GOLGA6L6A8MZA4 724 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 TMEM150CB9EJG8 249 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 E7EQ34 232 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 AP3B1O00203 1094 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 LIASO43766 372 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 FTCDO95954 541 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 ST6GAL1P15907 406 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 ARCN1P48444 511 aaKnown RBP11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 CD97P48960 835 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 LMAN1P49257 510 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 GDF10P55107 478 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 ZNF789Q5FWF6 425 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 SEL1L2Q5TEA6 688 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 PAPD7Q5XG87 772 aaKnown RBP11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 AFTPHQ6ULP2 937 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 SPESP1Q6UW49 350 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 PPP1R21Q6ZMI0 780 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 TMEM135Q86UB9 458 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 GPR135Q8IZ08 494 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 SLC38A9Q8NBW4 561 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 OR1L3Q8NH93 324 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 OR5K2Q8NHB8 316 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 ELMO1Q92556 727 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 N4BP2L2Q92802 583 aaPredicted RBP11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 IP6K3Q96PC2 410 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 TLR10Q9BXR5 811 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 SLC7A5P2Q9GIP4 190 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 ING2Q9H160 280 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 ETNK1Q9HBU6 452 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 ACSS2Q9NR19 701 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 TCFL5Q9UL49 500 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 G3BP2Q9UN86 482 aaKnown RBP11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 PACSIN2Q9UNF0 486 aaPredicted RBP11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 SNX7Q9UNH6 387 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 ZNF148Q9UQR1 794 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 ASF1AQ9Y294 204 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 SPTBP11277 2137 aa11.8□□□□□ -0.52
GTF3C1-204ENST00000564664 HECTD1Q9ULT8 2610 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 RP1L1Q8IWN7 2480 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 FLNCQ14315 2725 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 CCDC162PA2VCL2 907 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 E7EVH7 732 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 KRT86O43790 486 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 KLHL41O60662 606 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 IGHEP01854 428 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 RPN2P04844 631 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 FOXN2P32314 431 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 PGDP52209 483 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 ACVR1Q04771 509 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 ABRQ12979 859 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 PRKG2Q13237 762 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 UBAP2LQ14157 1087 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 OASLQ15646 514 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 DNAJC21Q5F1R6 531 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 AARS2Q5JTZ9 985 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 COLEC12Q5KU26 742 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 TSTD2Q5T7W7 516 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 TLDC1Q6P9B6 456 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 FBXO38Q6PIJ6 1188 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 UNC5AQ6ZN44 842 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 MED25Q71SY5 747 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 ATCAYQ86WG3 371 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 SLC13A5Q86YT5 568 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 SYTL1Q8IYJ3 562 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 TMEM102Q8N9M5 508 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 OR52K1Q8NGK4 314 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 OR13J1Q8NGT2 312 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 OR4L1Q8NH43 312 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 ADAMTS17Q8TE56 1095 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 DENND1AQ8TEH3 1009 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 ASZ1Q8WWH4 475 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 HDAC10Q969S8 669 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 PPM1MQ96MI6 270 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 SLC25A23Q9BV35 468 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 CARD6Q9BX69 1037 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 PCMTD2Q9NV79 361 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 PAK5Q9P286 719 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 PADI2Q9Y2J8 665 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms