RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 ZNF10P21506 573 aaPredicted RBP3.89□□□□□ -1.79
CHD9-212ENST00000564641 HOXC13P31276 330 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 CLK1P49759 484 aaKnown RBP3.89□□□□□ -1.79
CHD9-212ENST00000564641 CTSCP53634 463 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 MBTD1Q05BQ5 628 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 TUBB2AQ13885 445 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 CCNG2Q16589 344 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 PNLIPRP3Q17RR3 467 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 DUOXA1Q1HG43 343 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 TCTE1Q5JU00 501 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 ACAD10Q6JQN1 1059 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 CDC73Q6P1J9 531 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 METTL7BQ6UX53 244 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 ZSCAN30Q86W11 494 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 PM20D2Q8IYS1 436 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 RBM15BQ8NDT2 890 aaKnown RBP3.89□□□□□ -1.79
CHD9-212ENST00000564641 OR14L1PQ8NHC6 308 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 ZNF473Q8WTR7 871 aaKnown RBP3.89□□□□□ -1.79
CHD9-212ENST00000564641 FAM149B1Q96BN6 582 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 ZNF653Q96CK0 615 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 RRP36Q96EU6 259 aaKnown RBP3.89□□□□□ -1.79
CHD9-212ENST00000564641 NR1H4Q96RI1 486 aaPredicted RBP3.89□□□□□ -1.79
CHD9-212ENST00000564641 TUBB2BQ9BVA1 445 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 STRA6Q9BX79 667 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 TRIM15Q9C019 465 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 PAIP1Q9H074 479 aaKnown RBP3.89□□□□□ -1.79
CHD9-212ENST00000564641 PDZD7Q9H5P4 517 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 APOBEC3GQ9HC16 384 aaKnown RBP3.89□□□□□ -1.79
CHD9-212ENST00000564641 ABI3Q9P2A4 366 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 CAMK2AQ9UQM7 478 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 GOLGB1Q14789 3259 aaKnown RBP3.89□□□□□ -1.79
CHD9-212ENST00000564641 A0A1W2PP64 1363 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 NSD2O96028 1365 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 MYOM1P52179 1685 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 A0A0J9YWU9 116 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 PGPEP1LA6NFU8 196 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 A6NL46 340 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 DUXAA6NLW8 204 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 TMEM178BH3BS89 294 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 SNAP23O00161 211 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 SEC14L2O76054 403 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 CD48P09326 243 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 MSH3P20585 1137 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 CHMP24386 653 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 PSMA4P25789 261 aaKnown RBP3.88□□□□□ -1.79
CHD9-212ENST00000564641 ITGA3P26006 1051 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 CASP6P55212 293 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 KCNJ10P78508 379 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 MRPS34P82930 218 aaKnown RBP3.88□□□□□ -1.79
CHD9-212ENST00000564641 CBX1P83916 185 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 KRTAP5-4Q6L8H1 288 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 SASS6Q6UVJ0 657 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 C16orf54Q6UWD8 224 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 ANO5Q75V66 913 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 CENPQQ7L2Z9 268 aaPredicted RBP3.88□□□□□ -1.79
CHD9-212ENST00000564641 ARMC8Q8IUR7 673 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 SLC5A8Q8N695 610 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 EMC1Q8N766 993 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 TDRD7Q8NHU6 1098 aaKnown RBP3.88□□□□□ -1.79
CHD9-212ENST00000564641 SGCDQ92629 289 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 ZNF689Q96CS4 500 aaPredicted RBP3.88□□□□□ -1.79
CHD9-212ENST00000564641 ERP27Q96DN0 273 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 OXNAD1Q96HP4 312 aaPredicted RBP3.88□□□□□ -1.79
CHD9-212ENST00000564641 POM121L2Q96KW2 1035 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 CHCHD6Q9BRQ6 235 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 MCRIP2Q9BUT9 160 aaKnown RBP3.88□□□□□ -1.79
CHD9-212ENST00000564641 TRPC7Q9HCX4 862 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 SLC7A10Q9NS82 523 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 ECHDC1Q9NTX5 307 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 IRAK4Q9NWZ3 460 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 TMOD3Q9NYL9 352 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 CHMP5Q9NZZ3 219 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 CWC15Q9P013 229 aaKnown RBP3.88□□□□□ -1.79
CHD9-212ENST00000564641 TTLL3Q9Y4R7 772 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 KDM3AQ9Y4C1 1321 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 INSRP06213 1382 aa3.88□□□□□ -1.79
CHD9-212ENST00000564641 CD163L1Q9NR16 1453 aa3.87□□□□□ -1.79
CHD9-212ENST00000564641 A6NCN8 305 aa3.87□□□□□ -1.79
CHD9-212ENST00000564641 C5orf60A6NFR6 353 aa3.87□□□□□ -1.79
CHD9-212ENST00000564641 KRTAP16-1A8MUX0 517 aa3.87□□□□□ -1.79
CHD9-212ENST00000564641 USO1O60763 962 aaKnown RBP3.87□□□□□ -1.79
CHD9-212ENST00000564641 ZBED4O75132 1171 aa3.87□□□□□ -1.79
CHD9-212ENST00000564641 NKX2-2O95096 273 aa3.87□□□□□ -1.79
CHD9-212ENST00000564641 RTN3O95197 1032 aaPredicted RBP3.87□□□□□ -1.79
CHD9-212ENST00000564641 SCGB1D1O95968 90 aa3.87□□□□□ -1.79
CHD9-212ENST00000564641 RARSP54136 660 aaKnown RBP3.87□□□□□ -1.79
CHD9-212ENST00000564641 LMO4P61968 165 aa3.87□□□□□ -1.79
CHD9-212ENST00000564641 SPOCK1Q08629 439 aa3.87□□□□□ -1.79
CHD9-212ENST00000564641 DPCR1Q3MIW9 517 aa3.87□□□□□ -1.79
CHD9-212ENST00000564641 CDONQ4KMG0 1287 aa3.87□□□□□ -1.79
CHD9-212ENST00000564641 ZNF805Q5CZA5 627 aa3.87□□□□□ -1.79
CHD9-212ENST00000564641 SLC9C2Q5TAH2 1124 aa3.87□□□□□ -1.79
CHD9-212ENST00000564641 GBGT1Q8N5D6 347 aa3.87□□□□□ -1.79
CHD9-212ENST00000564641 GCSAMQ8N6F7 178 aa3.87□□□□□ -1.79
CHD9-212ENST00000564641 SLC38A9Q8NBW4 561 aa3.87□□□□□ -1.79
CHD9-212ENST00000564641 SMARCE1Q969G3 411 aa3.87□□□□□ -1.79
CHD9-212ENST00000564641 ZUFSPQ96AP4 578 aa3.87□□□□□ -1.79
CHD9-212ENST00000564641 RSRC1Q96IZ7 334 aaKnown RBP3.87□□□□□ -1.79
CHD9-212ENST00000564641 ATOH8Q96SQ7 321 aa3.87□□□□□ -1.79
CHD9-212ENST00000564641 SEMA3CQ99985 751 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms