RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 STAMBPL1Q96FJ0 436 aa13.29□□□□□ -0.28
CNOT1-206ENST00000564557 FOPNLQ96NB1 174 aa13.29□□□□□ -0.28
CNOT1-206ENST00000564557 OR6C1Q96RD1 312 aa13.29□□□□□ -0.28
CNOT1-206ENST00000564557 MAP3K3Q99759 626 aa13.29□□□□□ -0.28
CNOT1-206ENST00000564557 TFB2MQ9H5Q4 396 aaKnown RBP13.29□□□□□ -0.28
CNOT1-206ENST00000564557 CPNE5Q9HCH3 593 aa13.29□□□□□ -0.28
CNOT1-206ENST00000564557 PLSCR2Q9NRY7 297 aa13.29□□□□□ -0.28
CNOT1-206ENST00000564557 C20orf96Q9NUD7 363 aaPredicted RBP13.29□□□□□ -0.28
CNOT1-206ENST00000564557 SOHLH2Q9NX45 425 aa13.29□□□□□ -0.28
CNOT1-206ENST00000564557 MRFAP1Q9Y605 127 aa13.29□□□□□ -0.28
CNOT1-206ENST00000564557 EIF4E1BA6NMX2 242 aaKnown RBP13.28□□□□□ -0.28
CNOT1-206ENST00000564557 C2orf74A8MZ97 194 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 SMAPO00193 183 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 NDC80O14777 642 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 USP1O94782 785 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 ZBTB11O95625 1053 aaPredicted RBP13.28□□□□□ -0.28
CNOT1-206ENST00000564557 ESR1P03372 595 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 NELFEP18615 380 aaKnown RBP13.28□□□□□ -0.28
CNOT1-206ENST00000564557 SHMT2P34897 504 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 PPP1CAP62136 330 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 ACY1Q03154 408 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 ABRQ12979 859 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 LONRF1Q17RB8 773 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 ZNF658BQ4V348 819 aaPredicted RBP13.28□□□□□ -0.28
CNOT1-206ENST00000564557 XKR5Q6UX68 686 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 LMNTD2Q8IXW0 634 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 CACNA2D3Q8IZS8 1091 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 PDIK1LQ8N165 341 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 CARFQ8N187 725 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 OR5AR1Q8NGP9 310 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 OR5K2Q8NHB8 316 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 KLHL6Q8WZ60 621 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 CRELD1Q96HD1 420 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 ELMO2Q96JJ3 720 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 NAT9Q9BTE0 207 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 PRORYQ9H606 182 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 APMAPQ9HDC9 416 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 KCND1Q9NSA2 647 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 INTS10Q9NVR2 710 aaKnown RBP13.28□□□□□ -0.28
CNOT1-206ENST00000564557 RARRES3Q9UL19 164 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 CRYL1Q9Y2S2 319 aa13.28□□□□□ -0.28
CNOT1-206ENST00000564557 FREM2Q5SZK8 3169 aa13.27□□□□□ -0.28
CNOT1-206ENST00000564557 WDFY3Q8IZQ1 3526 aa13.27□□□□□ -0.28
CNOT1-206ENST00000564557 IGHV5-51A0A0C4DH38 117 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 TEX51A0A1B0GUA7 166 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.27□□□□□ -0.29
CNOT1-206ENST00000564557 BHMG1C9JSJ3 638 aaPredicted RBP13.27□□□□□ -0.29
CNOT1-206ENST00000564557 RAD1O60671 282 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 TTC4O95801 387 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 PGAM1P18669 254 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 ARNTP27540 789 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 MAP4P27816 1152 aaKnown RBP13.27□□□□□ -0.29
CNOT1-206ENST00000564557 AOAHP28039 575 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 ACADLP28330 430 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 PTGIRP43119 386 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 ETF1P62495 437 aaKnown RBP13.27□□□□□ -0.29
CNOT1-206ENST00000564557 SH3BP2P78314 561 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 HSD11B2P80365 405 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 MORF4L2Q15014 288 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 TYSND1Q2T9J0 566 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 BBS9Q3SYG4 887 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 ZNF470Q6ECI4 717 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 SYT10Q6XYQ8 523 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 TMEM135Q86UB9 458 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 BPHLQ86WA6 291 aaPredicted RBP13.27□□□□□ -0.29
CNOT1-206ENST00000564557 PPP1R3BQ86XI6 285 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 CILP2Q8IUL8 1156 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 SPNS2Q8IVW8 549 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 SLC22A15Q8IZD6 547 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 NLGN4XQ8N0W4 816 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 RAB42Q8N4Z0 105 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.27□□□□□ -0.29
CNOT1-206ENST00000564557 NLGN4YQ8NFZ3 816 aaPredicted RBP13.27□□□□□ -0.29
CNOT1-206ENST00000564557 PMEPA1Q969W9 287 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 KIAA1143Q96AT1 154 aaPredicted RBP13.27□□□□□ -0.29
CNOT1-206ENST00000564557 SIGLEC10Q96LC7 697 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 KCNK17Q96T54 332 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 KRT12Q99456 494 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 ULBP3Q9BZM4 244 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 TRIM31Q9BZY9 425 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 P2RY12Q9H244 342 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 XKR8Q9H6D3 395 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 FANCEQ9HB96 536 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 C1GALT1Q9NS00 363 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 SLC39A10Q9ULF5 831 aa13.27□□□□□ -0.29
CNOT1-206ENST00000564557 KMT2BQ9UMN6 2715 aaPredicted RBP13.27□□□□□ -0.29
CNOT1-206ENST00000564557 PIPSLA2A3N6 862 aa13.26□□□□□ -0.29
CNOT1-206ENST00000564557 EFCAB8A8MWE9 144 aa13.26□□□□□ -0.29
CNOT1-206ENST00000564557 BTN3A1O00481 513 aa13.26□□□□□ -0.29
CNOT1-206ENST00000564557 TTI1O43156 1089 aa13.26□□□□□ -0.29
CNOT1-206ENST00000564557 GPC4O75487 556 aa13.26□□□□□ -0.29
CNOT1-206ENST00000564557 STK17BO94768 372 aa13.26□□□□□ -0.29
CNOT1-206ENST00000564557 PKMP14618 531 aaKnown RBP13.26□□□□□ -0.29
CNOT1-206ENST00000564557 PRDX3P30048 256 aaKnown RBP13.26□□□□□ -0.29
CNOT1-206ENST00000564557 MAGEA3P43357 314 aa13.26□□□□□ -0.29
CNOT1-206ENST00000564557 KPNA2P52292 529 aaKnown RBP13.26□□□□□ -0.29
CNOT1-206ENST00000564557 ADARP55265 1226 aaKnown RBP13.26□□□□□ -0.29
CNOT1-206ENST00000564557 DHX9Q08211 1270 aaKnown RBP13.26□□□□□ -0.29
CNOT1-206ENST00000564557 TUBB3Q13509 450 aa13.26□□□□□ -0.29
CNOT1-206ENST00000564557 TTLL9Q3SXZ7 439 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms