RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 ERVK-10P10266 1014 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 THRAP10827 490 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 PKMP14618 531 aaKnown RBP6.03□□□□□ -1.44
CNOT1-204ENST00000563130 LIMK2P53671 638 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 PLTPP55058 493 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 EIF3BP55884 814 aaKnown RBP6.03□□□□□ -1.44
CNOT1-204ENST00000563130 SLC7A5Q01650 507 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 POU4F2Q12837 409 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 THOC5Q13769 683 aaKnown RBP6.03□□□□□ -1.44
CNOT1-204ENST00000563130 GBX1Q14549 363 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 AMZ1Q400G9 498 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 GLE1Q53GS7 698 aaKnown RBP6.03□□□□□ -1.44
CNOT1-204ENST00000563130 HP1BP3Q5SSJ5 553 aaPredicted RBP6.03□□□□□ -1.44
CNOT1-204ENST00000563130 NKAIN2Q5VXU1 208 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 DUS1LQ6P1R4 473 aaKnown RBP6.03□□□□□ -1.44
CNOT1-204ENST00000563130 TMEM71Q6P5X7 295 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 ZNF549Q6P9A3 640 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 TRMT10BQ6PF06 316 aaKnown RBP6.03□□□□□ -1.44
CNOT1-204ENST00000563130 IGF2-ASQ6U949 168 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 NAPRTQ6XQN6 538 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 KIAA0408Q6ZU52 694 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 USP53Q70EK8 1073 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 CYS1Q717R9 158 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 PDZD3Q86UT5 571 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 VRK3Q8IV63 474 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 TRIM48Q8IWZ4 208 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 KRT222Q8N1A0 295 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 FBXO36Q8NEA4 188 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 OR4D9Q8NGE8 314 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 ASZ1Q8WWH4 475 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 TFGQ92734 400 aaPredicted RBP6.03□□□□□ -1.44
CNOT1-204ENST00000563130 TMEM159Q96B96 161 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 ATXN7L3BQ96GX2 97 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 PRR11Q96HE9 360 aaPredicted RBP6.03□□□□□ -1.44
CNOT1-204ENST00000563130 C12orf66Q96MD2 445 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 TMEM74Q96NL1 305 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 DPYSL5Q9BPU6 564 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 FAM167BQ9BTA0 163 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 TSSK1BQ9BXA7 367 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 TWSG1Q9GZX9 223 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 RAB33BQ9H082 229 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 SEMA6CQ9H3T2 930 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 L2HGDHQ9H9P8 463 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 EPHA6Q9UF33 1036 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 SLC24A2Q9UI40 661 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 CFAP20Q9Y6A4 193 aaKnown RBP6.03□□□□□ -1.44
CNOT1-204ENST00000563130 CEP295Q9C0D2 2601 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 MN1Q10571 1320 aaPredicted RBP6.03□□□□□ -1.44
CNOT1-204ENST00000563130 AKAP13Q12802 2813 aa6.03□□□□□ -1.44
CNOT1-204ENST00000563130 IGHV5-10-1A0A0J9YXX1 117 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 C1QTNF9BB2RNN3 333 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 TMX2-CTNND1H3BSU7 103 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 IFRD1O00458 451 aaPredicted RBP6.02□□□□□ -1.44
CNOT1-204ENST00000563130 KPNA5O15131 536 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 NIPSNAP2O75323 286 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 WFS1O76024 890 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 UBXN7O94888 489 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 HAUS5O94927 633 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 C1QAP02745 245 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 C9P02748 559 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 AHSGP02765 367 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 F7P08709 466 aaPredicted RBP6.02□□□□□ -1.44
CNOT1-204ENST00000563130 C1QTNF9P0C862 333 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 VAMP1P23763 118 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 NDUFS1P28331 727 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 FMO4P31512 558 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 CAPZBP47756 277 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 CLCN7P51798 805 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 INHBCP55103 352 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 MPP1Q00013 466 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 HSPA14Q0VDF9 509 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 EIF3IQ13347 325 aaKnown RBP6.02□□□□□ -1.44
CNOT1-204ENST00000563130 TRA2AQ13595 282 aaKnown RBP eCLIP6.02□□□□□ -1.44
CNOT1-204ENST00000563130 BOP1Q14137 746 aaKnown RBP6.02□□□□□ -1.44
CNOT1-204ENST00000563130 MAP9Q49MG5 647 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 TEDDM1Q5T9Z0 273 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 PTRHD1Q6GMV3 140 aaKnown RBP6.02□□□□□ -1.44
CNOT1-204ENST00000563130 UNQ6494/PRO21346Q6UXR6 183 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 ARHGAP22Q7Z5H3 698 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 ANKMY2Q8IV38 441 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 ZBED8Q8IZ13 594 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 OTUD6BQ8N6M0 293 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 CEP112Q8N8E3 955 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 GSDMBQ8TAX9 411 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 KCNJ9Q92806 393 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 FOXP3Q9BZS1 431 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 FBXO6Q9NRD1 293 aaPredicted RBP6.02□□□□□ -1.44
CNOT1-204ENST00000563130 IARS2Q9NSE4 1012 aaKnown RBP6.02□□□□□ -1.44
CNOT1-204ENST00000563130 TMEM9Q9P0T7 183 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 KLHL42Q9P2K6 505 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 GALPQ9UBC7 116 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 PCDHGA8Q9Y5G5 932 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 HEBP2Q9Y5Z4 205 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 COLEC10Q9Y6Z7 277 aa6.02□□□□□ -1.44
CNOT1-204ENST00000563130 FRYQ5TBA9 3013 aa6.02□□□□□ -1.45
CNOT1-204ENST00000563130 CCDC187A0A096LP49 1063 aa6.02□□□□□ -1.45
CNOT1-204ENST00000563130 HGSO14964 777 aaPredicted RBP6.02□□□□□ -1.45
CNOT1-204ENST00000563130 ZNF500O60304 480 aaPredicted RBP6.02□□□□□ -1.45
CNOT1-204ENST00000563130 APOA4P06727 396 aa6.02□□□□□ -1.45
CNOT1-204ENST00000563130 PROS1P07225 676 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms