RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 PIWIL4Q7Z3Z4 852 aaKnown RBP18.34■□□□□ 0.53
RAB40C-207ENST00000563109 ZNF438Q7Z4V0 828 aa18.34■□□□□ 0.53
RAB40C-207ENST00000563109 GLRX5Q86SX6 157 aa18.34■□□□□ 0.53
RAB40C-207ENST00000563109 TBC1D1Q86TI0 1168 aaPredicted RBP18.34■□□□□ 0.53
RAB40C-207ENST00000563109 DCUN1D3Q8IWE4 304 aa18.34■□□□□ 0.53
RAB40C-207ENST00000563109 RIBC1Q8N443 379 aaPredicted RBP18.34■□□□□ 0.53
RAB40C-207ENST00000563109 OR5AR1Q8NGP9 310 aa18.34■□□□□ 0.53
RAB40C-207ENST00000563109 OR2W6PQ8NHA6 318 aa18.34■□□□□ 0.53
RAB40C-207ENST00000563109 OR5K2Q8NHB8 316 aa18.34■□□□□ 0.53
RAB40C-207ENST00000563109 MAGEC3Q8TD91 643 aa18.34■□□□□ 0.53
RAB40C-207ENST00000563109 ROPN1BQ9BZX4 212 aaPredicted RBP18.34■□□□□ 0.53
RAB40C-207ENST00000563109 ROPN1Q9HAT0 212 aaPredicted RBP18.34■□□□□ 0.53
RAB40C-207ENST00000563109 TBK1Q9UHD2 729 aa18.34■□□□□ 0.53
RAB40C-207ENST00000563109 RUVBL2Q9Y230 463 aaKnown RBP18.34■□□□□ 0.53
RAB40C-207ENST00000563109 HMX2A2RU54 273 aa18.33■□□□□ 0.52
RAB40C-207ENST00000563109 LILRA5A6NI73 299 aa18.33■□□□□ 0.52
RAB40C-207ENST00000563109 TM4SF5O14894 197 aa18.33■□□□□ 0.52
RAB40C-207ENST00000563109 PPM1DO15297 605 aa18.33■□□□□ 0.52
RAB40C-207ENST00000563109 MATN4O95460 622 aa18.33■□□□□ 0.52
RAB40C-207ENST00000563109 GP1BAP07359 652 aa18.33■□□□□ 0.52
RAB40C-207ENST00000563109 C8GP07360 202 aa18.33■□□□□ 0.52
RAB40C-207ENST00000563109 CEACAM1P13688 526 aa18.33■□□□□ 0.52
RAB40C-207ENST00000563109 MAP4P27816 1152 aaKnown RBP18.33■□□□□ 0.52
RAB40C-207ENST00000563109 GPR3P46089 330 aa18.33■□□□□ 0.52
RAB40C-207ENST00000563109 ACADVLP49748 655 aa18.33■□□□□ 0.52
RAB40C-207ENST00000563109 NOVA1P51513 510 aaKnown RBP18.33■□□□□ 0.52
RAB40C-207ENST00000563109 SP140Q13342 867 aa18.33■□□□□ 0.52
RAB40C-207ENST00000563109 GPR18Q14330 331 aa18.33■□□□□ 0.52
RAB40C-207ENST00000563109 RASA2Q15283 850 aa18.33■□□□□ 0.52
RAB40C-207ENST00000563109 TMEM26Q6ZUK4 368 aa18.33■□□□□ 0.52
RAB40C-207ENST00000563109 RAB42Q8N4Z0 105 aa18.33■□□□□ 0.52
RAB40C-207ENST00000563109 PHC3Q8NDX5 983 aa18.33■□□□□ 0.52
RAB40C-207ENST00000563109 CCDC3Q9BQI4 270 aa18.33■□□□□ 0.52
RAB40C-207ENST00000563109 ZMYND15Q9H091 742 aa18.33■□□□□ 0.52
RAB40C-207ENST00000563109 KIR3DX1Q9H7L2 352 aa18.33■□□□□ 0.52
RAB40C-207ENST00000563109 KCNK4Q9NYG8 393 aa18.33■□□□□ 0.52
RAB40C-207ENST00000563109 CTNNAL1Q9UBT7 734 aa18.33■□□□□ 0.52
RAB40C-207ENST00000563109 TDRKHQ9Y2W6 561 aaKnown RBP18.33■□□□□ 0.52
RAB40C-207ENST00000563109 ACOT9Q9Y305 439 aa18.33■□□□□ 0.52
RAB40C-207ENST00000563109 NFS1Q9Y697 457 aa18.33■□□□□ 0.52
RAB40C-207ENST00000563109 A0A096LPK6 155 aa18.32■□□□□ 0.52
RAB40C-207ENST00000563109 TLDC2A0PJX2 215 aa18.32■□□□□ 0.52
RAB40C-207ENST00000563109 PSIP1O75475 530 aaKnown RBP18.32■□□□□ 0.52
RAB40C-207ENST00000563109 RFPL3O75679 317 aa18.32■□□□□ 0.52
RAB40C-207ENST00000563109 TSPAN12O95859 305 aa18.32■□□□□ 0.52
RAB40C-207ENST00000563109 ALDOAP04075 364 aaKnown RBP18.32■□□□□ 0.52
RAB40C-207ENST00000563109 MPOP05164 745 aa18.32■□□□□ 0.52
RAB40C-207ENST00000563109 SLC35E2BP0CK96 405 aa18.32■□□□□ 0.52
RAB40C-207ENST00000563109 CCDC166P0CW27 439 aa18.32■□□□□ 0.52
RAB40C-207ENST00000563109 CYP2A7P20853 494 aa18.32■□□□□ 0.52
RAB40C-207ENST00000563109 BDKRB1P46663 353 aa18.32■□□□□ 0.52
RAB40C-207ENST00000563109 EPHA4P54764 986 aa18.32■□□□□ 0.52
RAB40C-207ENST00000563109 PRKG2Q13237 762 aa18.32■□□□□ 0.52
RAB40C-207ENST00000563109 ILKQ13418 452 aa18.32■□□□□ 0.52
RAB40C-207ENST00000563109 NR1D2Q14995 579 aa18.32■□□□□ 0.52
RAB40C-207ENST00000563109 CCDC157Q569K6 752 aa18.32■□□□□ 0.52
RAB40C-207ENST00000563109 PERM1Q5SV97 790 aa18.32■□□□□ 0.52
RAB40C-207ENST00000563109 TMEM207Q6UWW9 146 aa18.32■□□□□ 0.52
RAB40C-207ENST00000563109 UBE2R2Q712K3 238 aaPredicted RBP18.32■□□□□ 0.52
RAB40C-207ENST00000563109 ZNF761Q86XN6 746 aaPredicted RBP18.32■□□□□ 0.52
RAB40C-207ENST00000563109 ISL2Q96A47 359 aa18.32■□□□□ 0.52
RAB40C-207ENST00000563109 PDLIM5Q96HC4 596 aaKnown RBP18.32■□□□□ 0.52
RAB40C-207ENST00000563109 AHCYL2Q96HN2 611 aaKnown RBP18.32■□□□□ 0.52
RAB40C-207ENST00000563109 CABS1Q96KC9 395 aa18.32■□□□□ 0.52
RAB40C-207ENST00000563109 TSNARE1Q96NA8 513 aa18.32■□□□□ 0.52
RAB40C-207ENST00000563109 DERL2Q9GZP9 239 aa18.32■□□□□ 0.52
RAB40C-207ENST00000563109 VPS11Q9H270 941 aa18.32■□□□□ 0.52
RAB40C-207ENST00000563109 EPB41L1Q9H4G0 881 aa18.32■□□□□ 0.52
RAB40C-207ENST00000563109 SYNDIG1Q9H7V2 258 aa18.32■□□□□ 0.52
RAB40C-207ENST00000563109 UQCRHLA0A096LP55 91 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 PRAMEF33A0A0G2JMD5 474 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 BTN3A1O00481 513 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 SLC16A5O15375 505 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 ZBTB14O43829 449 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 WISP3O95389 354 aaPredicted RBP18.31■□□□□ 0.52
RAB40C-207ENST00000563109 C1orf105O95561 183 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 C2P06681 752 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 UQCRHP07919 91 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 KRT15P19012 456 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 KCNA4P22459 653 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 ALDH4A1P30038 563 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 SLC26A3P40879 764 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 ATP6V0D1P61421 351 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 GPLD1P80108 840 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 CSHL1Q14406 222 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 CYHR1Q6ZMK1 362 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 SPRED1Q7Z699 444 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 CROCCP2Q86T23 111 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 SPNS2Q8IVW8 549 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 Q8N9G6 341 aaPredicted RBP18.31■□□□□ 0.52
RAB40C-207ENST00000563109 OR10G6Q8NH81 332 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 LCN9Q8WX39 176 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 ASB11Q8WXH4 323 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 ANKRD7Q92527 254 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 RAD51AP1Q96B01 352 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 RUFY1Q96T51 708 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.31■□□□□ 0.52
RAB40C-207ENST00000563109 APOBEC2Q9Y235 224 aaKnown RBP18.31■□□□□ 0.52
RAB40C-207ENST00000563109 PCDHGA1Q9Y5H4 931 aa18.31■□□□□ 0.52
RAB40C-207ENST00000563109 SPAARA0A1B0GVQ0 90 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms