RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 PRKG2Q13237 762 aa16.05■□□□□ 0.16
CMTM3-205ENST00000562707 MYBPC3Q14896 1274 aa16.05■□□□□ 0.16
CMTM3-205ENST00000562707 BBS12Q6ZW61 710 aa16.05■□□□□ 0.16
CMTM3-205ENST00000562707 MRGPREQ86SM8 312 aa16.05■□□□□ 0.16
CMTM3-205ENST00000562707 TM9SF4Q92544 642 aa16.05■□□□□ 0.16
CMTM3-205ENST00000562707 TFGQ92734 400 aaPredicted RBP16.05■□□□□ 0.16
CMTM3-205ENST00000562707 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.05■□□□□ 0.16
CMTM3-205ENST00000562707 LRRC45Q96CN5 670 aa16.05■□□□□ 0.16
CMTM3-205ENST00000562707 TCTN2Q96GX1 697 aa16.05■□□□□ 0.16
CMTM3-205ENST00000562707 C19orf43Q9BQ61 176 aa16.05■□□□□ 0.16
CMTM3-205ENST00000562707 HEMGNQ9BXL5 484 aa16.05■□□□□ 0.16
CMTM3-205ENST00000562707 ILKAPQ9H0C8 392 aaPredicted RBP16.05■□□□□ 0.16
CMTM3-205ENST00000562707 XKR8Q9H6D3 395 aa16.05■□□□□ 0.16
CMTM3-205ENST00000562707 C10orf88Q9H8K7 445 aa16.05■□□□□ 0.16
CMTM3-205ENST00000562707 ASF1BQ9NVP2 202 aa16.05■□□□□ 0.16
CMTM3-205ENST00000562707 ZDHHC3Q9NYG2 299 aa16.05■□□□□ 0.16
CMTM3-205ENST00000562707 NDOR1Q9UHB4 597 aa16.05■□□□□ 0.16
CMTM3-205ENST00000562707 ERRFI1Q9UJM3 462 aaPredicted RBP16.05■□□□□ 0.16
CMTM3-205ENST00000562707 SLC5A6Q9Y289 635 aa16.05■□□□□ 0.16
CMTM3-205ENST00000562707 PTRH2Q9Y3E5 179 aaKnown RBP16.05■□□□□ 0.16
CMTM3-205ENST00000562707 SPTBN1Q01082 2364 aaKnown RBP16.04■□□□□ 0.16
CMTM3-205ENST00000562707 WIPF3A6NGB9 483 aa16.04■□□□□ 0.16
CMTM3-205ENST00000562707 APOC4-APOC2K7ER74 178 aa16.04■□□□□ 0.16
CMTM3-205ENST00000562707 KLF7O75840 302 aaPredicted RBP16.04■□□□□ 0.16
CMTM3-205ENST00000562707 OR2B3O76000 313 aa16.04■□□□□ 0.16
CMTM3-205ENST00000562707 STK10O94804 968 aaKnown RBP16.04■□□□□ 0.16
CMTM3-205ENST00000562707 CBX6O95503 412 aa16.04■□□□□ 0.16
CMTM3-205ENST00000562707 APOC2P02655 101 aa16.04■□□□□ 0.16
CMTM3-205ENST00000562707 CBSLP0DN79 551 aa16.04■□□□□ 0.16
CMTM3-205ENST00000562707 COL8A1P27658 744 aa16.04■□□□□ 0.16
CMTM3-205ENST00000562707 PDHA2P29803 388 aa16.04■□□□□ 0.16
CMTM3-205ENST00000562707 CBSP35520 551 aa16.04■□□□□ 0.16
CMTM3-205ENST00000562707 FOLR3P41439 243 aa16.04■□□□□ 0.16
CMTM3-205ENST00000562707 HADHBP55084 474 aaKnown RBP16.04■□□□□ 0.16
CMTM3-205ENST00000562707 DCDP81605 110 aaKnown RBP16.04■□□□□ 0.16
CMTM3-205ENST00000562707 BOP1Q14137 746 aaKnown RBP16.04■□□□□ 0.16
CMTM3-205ENST00000562707 ZRANB3Q5FWF4 1079 aa16.04■□□□□ 0.16
CMTM3-205ENST00000562707 ZNF385CQ66K41 422 aaPredicted RBP16.04■□□□□ 0.16
CMTM3-205ENST00000562707 ZNF787Q6DD87 383 aa16.04■□□□□ 0.16
CMTM3-205ENST00000562707 SPESP1Q6UW49 350 aa16.04■□□□□ 0.16
CMTM3-205ENST00000562707 ADGRF3Q8IZF5 1079 aa16.04■□□□□ 0.16
CMTM3-205ENST00000562707 GALNT16Q8N428 558 aa16.04■□□□□ 0.16
CMTM3-205ENST00000562707 C19orf47Q8N9M1 422 aaKnown RBP16.04■□□□□ 0.16
CMTM3-205ENST00000562707 C5orf34Q96MH7 638 aa16.04■□□□□ 0.16
CMTM3-205ENST00000562707 PPP1R2P1Q96PQ5 205 aa16.04■□□□□ 0.16
CMTM3-205ENST00000562707 NRTNQ99748 197 aa16.04■□□□□ 0.16
CMTM3-205ENST00000562707 HGH1Q9BTY7 390 aa16.04■□□□□ 0.16
CMTM3-205ENST00000562707 IFT80Q9P2H3 777 aaPredicted RBP16.04■□□□□ 0.16
CMTM3-205ENST00000562707 COPG1Q9Y678 874 aaKnown RBP16.04■□□□□ 0.16
CMTM3-205ENST00000562707 ICE1Q9Y2F5 2266 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 UNC79Q9P2D8 2635 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 RP1L1Q8IWN7 2480 aaPredicted RBP16.03■□□□□ 0.16
CMTM3-205ENST00000562707 ANKUB1A6NFN9 424 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 MFAP3LO75121 409 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 LDLRP01130 860 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 GSTM1P09488 218 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 ATXN8OSP0DMR3 200 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 PSMB4P28070 264 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 MC4RP32245 332 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 ZNF140P52738 457 aaPredicted RBP16.03■□□□□ 0.16
CMTM3-205ENST00000562707 GSTM4Q03013 218 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 OLIG2Q13516 323 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 DCAF10Q5QP82 559 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 ANKRD20A2Q5SQ80 823 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 ANKRD20A1Q5TYW2 823 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 C1orf189Q5VU69 101 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 ANKRD20A3Q5VUR7 823 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 RHBDD2Q6NTF9 364 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 IGFL3Q6UXB1 125 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 TAS2R42Q7RTR8 314 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 CDKL3Q8IVW4 592 aaPredicted RBP16.03■□□□□ 0.16
CMTM3-205ENST00000562707 ZADH2Q8N4Q0 377 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 PROKR1Q8TCW9 393 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 PTERQ96BW5 349 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 GORASP1Q9BQQ3 440 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 SPRTNQ9H040 489 aaPredicted RBP16.03■□□□□ 0.16
CMTM3-205ENST00000562707 GOLPH3Q9H4A6 298 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 FAM60AQ9NP50 221 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 TXLNGQ9NUQ3 528 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 P4HTMQ9NXG6 502 aa16.03■□□□□ 0.16
CMTM3-205ENST00000562707 FEZ2Q9UHY8 353 aaPredicted RBP16.03■□□□□ 0.16
CMTM3-205ENST00000562707 TNRC6AQ8NDV7 1962 aaKnown RBP16.03■□□□□ 0.16
CMTM3-205ENST00000562707 CLDN1O95832 211 aa16.02■□□□□ 0.16
CMTM3-205ENST00000562707 CTNNA2P26232 953 aa16.02■□□□□ 0.16
CMTM3-205ENST00000562707 SHMT2P34897 504 aa16.02■□□□□ 0.16
CMTM3-205ENST00000562707 DCTP40126 519 aa16.02■□□□□ 0.16
CMTM3-205ENST00000562707 MAGEA1P43355 309 aa16.02■□□□□ 0.16
CMTM3-205ENST00000562707 GLRBP48167 497 aa16.02■□□□□ 0.16
CMTM3-205ENST00000562707 TRIM73Q86UV7 250 aa16.02■□□□□ 0.16
CMTM3-205ENST00000562707 SERPINA9Q86WD7 417 aa16.02■□□□□ 0.16
CMTM3-205ENST00000562707 VSTM4Q8IW00 320 aa16.02■□□□□ 0.16
CMTM3-205ENST00000562707 TBL1YQ9BQ87 522 aa16.02■□□□□ 0.16
CMTM3-205ENST00000562707 AP1M1Q9BXS5 423 aa16.02■□□□□ 0.16
CMTM3-205ENST00000562707 ZNF552Q9H707 407 aaPredicted RBP16.02■□□□□ 0.16
CMTM3-205ENST00000562707 ATP13A2Q9NQ11 1180 aa16.02■□□□□ 0.16
CMTM3-205ENST00000562707 IRAK4Q9NWZ3 460 aa16.02■□□□□ 0.16
CMTM3-205ENST00000562707 SRPK3Q9UPE1 567 aa16.02■□□□□ 0.16
CMTM3-205ENST00000562707 IGLV3-16A0A075B6K0 115 aa16.01■□□□□ 0.15
CMTM3-205ENST00000562707 MACROD2A1Z1Q3 448 aa16.01■□□□□ 0.15
CMTM3-205ENST00000562707 CCL22O00626 93 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms