RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 MAGEC1O60732 1142 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 HNRNPCL1O60812 293 aaKnown RBP6.4□□□□□ -1.38
CAPN3-210ENST00000561817 DIAPH2O60879 1101 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 ADAM23O75077 832 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 MTX2O75431 263 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 SUPT3HO75486 399 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 RECQL5O94762 991 aaPredicted RBP6.4□□□□□ -1.38
CAPN3-210ENST00000561817 SUPT7LO94864 414 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 SLCO2B1O94956 709 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 EPHX1P07099 455 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 ELFN1P0C7U0 828 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 MPC1LP0DKB6 136 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 C6P13671 934 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 ENO3P13929 434 aaPredicted RBP6.4□□□□□ -1.38
CAPN3-210ENST00000561817 GFAPP14136 432 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 CALB2P22676 271 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 NFKBIAP25963 317 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 PTPN4P29074 926 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 EPHA3P29320 983 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 PRDX6P30041 224 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 PRDX3P30048 256 aaKnown RBP6.4□□□□□ -1.38
CAPN3-210ENST00000561817 CPOXP36551 454 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 PSMD8P48556 350 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 PRLHRP49683 370 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 RGS4P49798 205 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 ST13P50502 369 aaKnown RBP6.4□□□□□ -1.38
CAPN3-210ENST00000561817 COPAP53621 1224 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 CTSCP53634 463 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 FOXA1P55317 472 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 NAA20P61599 178 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 RPS14P62263 151 aaKnown RBP6.4□□□□□ -1.38
CAPN3-210ENST00000561817 SNRPNP63162 240 aaKnown RBP6.4□□□□□ -1.38
CAPN3-210ENST00000561817 ELF3P78545 371 aaPredicted RBP6.4□□□□□ -1.38
CAPN3-210ENST00000561817 CLCQ05315 142 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 ELP6Q0PNE2 266 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 LCP2Q13094 533 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 KLF10Q13118 480 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 ACOX1Q15067 660 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 SMAD2Q15796 467 aaKnown RBP6.4□□□□□ -1.38
CAPN3-210ENST00000561817 TBCCQ15814 346 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 PREPLQ4J6C6 727 aaPredicted RBP6.4□□□□□ -1.38
CAPN3-210ENST00000561817 BCL7AQ4VC05 210 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 CCDC92Q53HC0 331 aaPredicted RBP6.4□□□□□ -1.38
CAPN3-210ENST00000561817 FBXO48Q5FWF7 155 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 TMEM196Q5HYL7 178 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 CDKL4Q5MAI5 379 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 LDLRAP1Q5SW96 308 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 PLEKHS1Q5SXH7 462 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 KANK2Q63ZY3 851 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 ANKS6Q68DC2 871 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 KIAA1211LQ6NV74 962 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 FIGNL1Q6PIW4 674 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 NEK10Q6ZWH5 1172 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 LARP4Q71RC2 724 aaKnown RBP eCLIP6.4□□□□□ -1.38
CAPN3-210ENST00000561817 SYVN1Q86TM6 617 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 PHYKPLQ8IUZ5 450 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 MMAAQ8IVH4 418 aaKnown RBP6.4□□□□□ -1.38
CAPN3-210ENST00000561817 CLYBLQ8N0X4 340 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 KIF2BQ8N4N8 673 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 HMGCLL1Q8TB92 370 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 AGR3Q8TD06 166 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 ASB11Q8WXH4 323 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 EXT2Q93063 718 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 RAB7BQ96AH8 199 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 KLHL29Q96CT2 875 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 AP2M1Q96CW1 435 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 ABHD17AQ96GS6 310 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 C3orf30Q96M34 536 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 RILPQ96NA2 401 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 PANX3Q96QZ0 392 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 UHRF1Q96T88 793 aaPredicted RBP6.4□□□□□ -1.38
CAPN3-210ENST00000561817 GABRG3Q99928 467 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 P2RY13Q9BPV8 354 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 TMEM79Q9BSE2 394 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 WRAP53Q9BUR4 548 aaKnown RBP6.4□□□□□ -1.38
CAPN3-210ENST00000561817 TBC1D10AQ9BXI6 508 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 CADM1Q9BY67 442 aaKnown RBP6.4□□□□□ -1.38
CAPN3-210ENST00000561817 EPHX3Q9H6B9 360 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 EML4Q9HC35 981 aaKnown RBP6.4□□□□□ -1.38
CAPN3-210ENST00000561817 TCF7L2Q9NQB0 619 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 TAS2R1Q9NYW7 299 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 ZIM2Q9NZV7 527 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 SERGEFQ9UGK8 458 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 COQ6Q9Y2Z9 468 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 DNAJC15Q9Y5T4 150 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 GOLGA8QA0A0J9YX86 632 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 GOLGA8OA6NCC3 632 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 TRPC5OSA6NMA1 111 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 E9PBE3 544 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 C1QTNF3-AMACRE9PGA6 284 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 SPECC1L-ADORA2AF8WAN1 911 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 GOLGA8NF8WBI6 632 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 OR7A17O14581 309 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 AZIN1O14977 448 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 SLC22A2O15244 555 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 MID1O15344 667 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 FFAR2O15552 330 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 AKAP10O43572 662 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 MGRN1O60291 552 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 KLHL41O60662 606 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms