RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 ETV5P41161 510 aa1.98□□□□□ -2.09
SPG11-222ENST00000560435 GUCY2DQ02846 1103 aa1.98□□□□□ -2.09
SPG11-222ENST00000560435 CD300CQ08708 224 aa1.98□□□□□ -2.09
SPG11-222ENST00000560435 BAK1Q16611 211 aa1.98□□□□□ -2.09
SPG11-222ENST00000560435 NHLRC1Q6VVB1 395 aa1.98□□□□□ -2.09
SPG11-222ENST00000560435 FRRS1Q6ZNA5 592 aa1.98□□□□□ -2.09
SPG11-222ENST00000560435 METTL4Q8N3J2 472 aa1.98□□□□□ -2.09
SPG11-222ENST00000560435 ATP8B4Q8TF62 1192 aa1.98□□□□□ -2.09
SPG11-222ENST00000560435 NPRL2Q8WTW4 380 aa1.98□□□□□ -2.09
SPG11-222ENST00000560435 SGCDQ92629 289 aa1.98□□□□□ -2.09
SPG11-222ENST00000560435 NR1H4Q96RI1 486 aaPredicted RBP1.98□□□□□ -2.09
SPG11-222ENST00000560435 FNBP1Q96RU3 617 aa1.98□□□□□ -2.09
SPG11-222ENST00000560435 ABHD6Q9BV23 337 aa1.98□□□□□ -2.09
SPG11-222ENST00000560435 MAN2C1Q9NTJ4 1040 aa1.98□□□□□ -2.09
SPG11-222ENST00000560435 OSGIN1Q9UJX0 560 aa1.98□□□□□ -2.09
SPG11-222ENST00000560435 SLC6A5Q9Y345 797 aa1.98□□□□□ -2.09
SPG11-222ENST00000560435 PCDHGB3Q9Y5G1 929 aa1.98□□□□□ -2.09
SPG11-222ENST00000560435 CSNK1G3Q9Y6M4 447 aa1.98□□□□□ -2.09
SPG11-222ENST00000560435 A0A1W2PR80 420 aa1.97□□□□□ -2.09
SPG11-222ENST00000560435 H0Y9J4 135 aa1.97□□□□□ -2.09
SPG11-222ENST00000560435 H3BQ06 376 aaPredicted RBP1.97□□□□□ -2.09
SPG11-222ENST00000560435 GALR3O60755 368 aaPredicted RBP1.97□□□□□ -2.09
SPG11-222ENST00000560435 HNRNPA1P09651 372 aaKnown RBP eCLIP1.97□□□□□ -2.09
SPG11-222ENST00000560435 TFAP4Q01664 338 aa1.97□□□□□ -2.09
SPG11-222ENST00000560435 FCHO2Q0JRZ9 810 aa1.97□□□□□ -2.09
SPG11-222ENST00000560435 FRG1Q14331 258 aaKnown RBP1.97□□□□□ -2.09
SPG11-222ENST00000560435 DPCR1Q3MIW9 517 aa1.97□□□□□ -2.09
SPG11-222ENST00000560435 OLFML2AQ68BL7 652 aa1.97□□□□□ -2.09
SPG11-222ENST00000560435 SLC25A47Q6Q0C1 308 aa1.97□□□□□ -2.09
SPG11-222ENST00000560435 ENAHQ8N8S7 591 aaPredicted RBP1.97□□□□□ -2.09
SPG11-222ENST00000560435 NFKBIDQ8NI38 313 aa1.97□□□□□ -2.09
SPG11-222ENST00000560435 C11orf45Q8TAV5 145 aa1.97□□□□□ -2.09
SPG11-222ENST00000560435 MAP7D2Q96T17 732 aa1.97□□□□□ -2.09
SPG11-222ENST00000560435 SCPEP1Q9HB40 452 aa1.97□□□□□ -2.09
SPG11-222ENST00000560435 R3HDM2Q9Y2K5 976 aaKnown RBP1.97□□□□□ -2.09
SPG11-222ENST00000560435 TDRD6O60522 2096 aaKnown RBP1.96□□□□□ -2.1
SPG11-222ENST00000560435 A0A087WWV3 80 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 HCRTR2O43614 444 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 LRCH4O75427 683 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 VTNP04004 478 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 HIST1H2ABP04908 130 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 IGHV4-31P0DP07 118 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 HIST1H2ADP20671 130 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 ACADLP28330 430 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 HLA-FP30511 346 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 PAFAH1B1P43034 410 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 MSH2P43246 934 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 TSFMP43897 325 aaKnown RBP1.96□□□□□ -2.1
SPG11-222ENST00000560435 CSTF3Q12996 717 aaKnown RBP1.96□□□□□ -2.1
SPG11-222ENST00000560435 CCNG2Q16589 344 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 FAM69AQ5T7M9 428 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 CCBE1Q6UXH8 406 aaPredicted RBP1.96□□□□□ -2.1
SPG11-222ENST00000560435 GDPGP1Q6ZNW5 385 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 HIST3H2AQ7L7L0 130 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 LRRTM4Q86VH4 590 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 CATSPERDQ86XM0 798 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 ARHGAP12Q8IWW6 846 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 C11orf42Q8N5U0 333 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 SPATA5Q8NB90 893 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 GPRC5AQ8NFJ5 357 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 FAM149B1Q96BN6 582 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 LGMNQ99538 433 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 ARRDC1-AS1Q9H2J1 176 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 OR6C2Q9NZP2 312 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 IKZF3Q9UKT9 509 aa1.96□□□□□ -2.1
SPG11-222ENST00000560435 PLEKHD1A6NEE1 506 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 ZNF354AO60765 605 aaPredicted RBP1.95□□□□□ -2.1
SPG11-222ENST00000560435 CCNDBP1O95273 360 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 SEC24AO95486 1093 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 F9P00740 461 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 IGHEP01854 428 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 FDPSP14324 419 aaKnown RBP1.95□□□□□ -2.1
SPG11-222ENST00000560435 ATP6V1B1P15313 513 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 ZNF19P17023 458 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 LHCGRP22888 699 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 OXTRP30559 389 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 GPR143P51810 404 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 VAMP2P63027 116 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 OLR1P78380 273 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 CX3CL1P78423 397 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 BRD3Q15059 726 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 NAB2Q15742 525 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 PDLIM3Q53GG5 364 aaPredicted RBP1.95□□□□□ -2.1
SPG11-222ENST00000560435 C20orf194Q5TEA3 1177 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 ZFAND4Q86XD8 727 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 PHC2Q8IXK0 858 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 CD177Q8N6Q3 437 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 KLHDC1Q8N7A1 406 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 PPFIBP2Q8ND30 876 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 GATAD1Q8WUU5 269 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 SMARCE1Q969G3 411 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 SERAC1Q96JX3 654 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 C10orf90Q96M02 699 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 MGME1Q9BQP7 344 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 VN1R1Q9GZP7 353 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 CPVLQ9H3G5 476 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 FGF21Q9NSA1 209 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 NPAP1Q9NZP6 1156 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 PPP2R2CQ9Y2T4 447 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 WIPI2Q9Y4P8 454 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms