RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 RHEBL1Q8TAI7 183 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 MDM1Q8TC05 714 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 SAP25Q8TEE9 199 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 PATE1Q8WXA2 126 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 TCEAL3Q969E4 200 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 TMEM159Q96B96 161 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 ALKBH8Q96BT7 664 aaKnown RBP9.15□□□□□ -0.94
HERC1-206ENST00000559996 SMC6Q96SB8 1091 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 TSSK1BQ9BXA7 367 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 SLC12A9Q9BXP2 914 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 WWP1Q9H0M0 922 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 NMRAL1Q9HBL8 299 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 MED4Q9NPJ6 270 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 FAM86C1Q9NVL1 165 aa9.15□□□□□ -0.94
HERC1-206ENST00000559996 APOBEC3BQ9UH17 382 aaKnown RBP9.15□□□□□ -0.94
HERC1-206ENST00000559996 CFAP20Q9Y6A4 193 aaKnown RBP9.15□□□□□ -0.94
HERC1-206ENST00000559996 ANKRD12Q6UB98 2062 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 TMEM120BA0PK00 339 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 NPEPPSL1A6NEC2 478 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 GOLGA6L10A6NI86 522 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 OR52A4PA6NMU1 304 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 ARHGEF33A8MVX0 844 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 LMO7DNF2Z398 122 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 F8W8V4 182 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 COPEO14579 308 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 CDX4O14627 284 aaPredicted RBP9.14□□□□□ -0.95
HERC1-206ENST00000559996 TAPBPO15533 448 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 AQP9O43315 295 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 NOBOXO60393 691 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 DLX3O60479 287 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 SDC3O75056 442 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 GLRA3O75311 464 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 ZNF806P0C7X5 589 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 XRCC1P18887 633 aaPredicted RBP9.14□□□□□ -0.95
HERC1-206ENST00000559996 IDSP22304 550 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 ATP6V0D1P61421 351 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 FAM83EQ2M2I3 478 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 TTLL9Q3SXZ7 439 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 TAF1BQ53T94 588 aaPredicted RBP9.14□□□□□ -0.95
HERC1-206ENST00000559996 LRRC8EQ6NSJ5 796 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 DUS1LQ6P1R4 473 aaKnown RBP9.14□□□□□ -0.95
HERC1-206ENST00000559996 SLC30A9Q6PML9 568 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 TBC1D1Q86TI0 1168 aaPredicted RBP9.14□□□□□ -0.95
HERC1-206ENST00000559996 LCA5Q86VQ0 697 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 LRRC56Q8IYG6 542 aaPredicted RBP9.14□□□□□ -0.95
HERC1-206ENST00000559996 FBXO15Q8NCQ5 510 aaPredicted RBP9.14□□□□□ -0.95
HERC1-206ENST00000559996 GPR156Q8NFN8 814 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 OR5AR1Q8NGP9 310 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 OR6Y1Q8NGX8 325 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 LMX1AQ8TE12 382 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 TFGQ92734 400 aaPredicted RBP9.14□□□□□ -0.95
HERC1-206ENST00000559996 SKA1Q96BD8 255 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 MOCOSQ96EN8 888 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 FAM111AQ96PZ2 611 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 PHOX2BQ99453 314 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 MRPL57Q9BQC6 102 aaKnown RBP9.14□□□□□ -0.95
HERC1-206ENST00000559996 GSDMCQ9BYG8 508 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 KCNH6Q9H252 994 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 ACBD3Q9H3P7 528 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 ALG9Q9H6U8 611 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 GAREM1Q9H706 876 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 RDH14Q9HBH5 336 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 PARD6AQ9NPB6 346 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 RXFP3Q9NSD7 469 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 SPASTQ9UBP0 616 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 CSNK1G3Q9Y6M4 447 aa9.14□□□□□ -0.95
HERC1-206ENST00000559996 TRBV23OR9-2A0A075B6M9 112 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 LY6G6EA0A0G2JKS1 128 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 CCDC189A1A4V9 331 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 NEMP2A6NFY4 417 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 PROB1E7EW31 1015 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 BTN3A1O00481 513 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 PPM1DO15297 605 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 SLC16A5O15375 505 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 SNX2O60749 519 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 KERAO60938 352 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 CFIP05156 583 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 RBP1P09455 135 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 F3P13726 295 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 CTSEP14091 401 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 ENGP17813 658 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 EPHA8P29322 1005 aaPredicted RBP9.13□□□□□ -0.95
HERC1-206ENST00000559996 BDKRB1P46663 353 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 RGS4P49798 205 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 PPP2R2AP63151 447 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 UBE2IP63279 158 aaKnown RBP9.13□□□□□ -0.95
HERC1-206ENST00000559996 CDKL1Q00532 357 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 ILF3Q12906 894 aaKnown RBP eCLIP9.13□□□□□ -0.95
HERC1-206ENST00000559996 PCLAFQ15004 111 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 ELOCQ15369 112 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 TGFBIQ15582 683 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 SEPT7Q16181 437 aaKnown RBP9.13□□□□□ -0.95
HERC1-206ENST00000559996 TSNAXIP1Q2TAA8 658 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 C18orf21Q32NC0 220 aaPredicted RBP9.13□□□□□ -0.95
HERC1-206ENST00000559996 CCDC153Q494R4 210 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 MBOAT1Q6ZNC8 495 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 UBE2R2Q712K3 238 aaPredicted RBP9.13□□□□□ -0.95
HERC1-206ENST00000559996 RABEPKQ7Z6M1 372 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 TAF8Q7Z7C8 310 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 GATAD2AQ86YP4 633 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms