RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 CEP44Q9C0F1 390 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 IPPKQ9H8X2 491 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 RC3H2Q9HBD1 1191 aaKnown RBP10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 MAGEE1Q9HCI5 957 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 EURLQ9NYK6 297 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 TMA7Q9Y2S6 64 aaKnown RBP10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 LINC00854A0A1B0GVQ3 168 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 B4DGG1 531 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 GUCY1B2O75343 617 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 LINC00032P0C843 101 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 ALPPL2P10696 532 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 HGFP14210 728 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 ATP1B2P14415 290 aaPredicted RBP10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 TLX1P31314 330 aaPredicted RBP10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 RPS21P63220 83 aaKnown RBP10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 ASRGL1Q7L266 308 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 MAGEE2Q8TD90 523 aaPredicted RBP10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 PHF12Q96QT6 1004 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 SRMSQ9H3Y6 488 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 WDR55Q9H6Y2 383 aaPredicted RBP10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 EXOSC4Q9NPD3 245 aaKnown RBP10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 ZNF358Q9NW07 568 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 RAB26Q9ULW5 256 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 RAP2CQ9Y3L5 183 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 TIMM22Q9Y584 194 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 MFN2O95140 757 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 HPGDP15428 266 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 DLG1Q12959 904 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 WDR45BQ5MNZ6 344 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 NADSYN1Q6IA69 706 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 ZNF621Q6ZSS3 439 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 STK32CQ86UX6 486 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 PYCR2Q96C36 320 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 SLC7A6OSQ96CW6 309 aaPredicted RBP10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 HBEGFQ99075 208 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 AIF1LQ9BQI0 150 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 AARSD1Q9BTE6 412 aaKnown RBP10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 KIFC1Q9BW19 673 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 UBE2ZQ9H832 354 aaPredicted RBP10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 TRAF6Q9Y4K3 522 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 KNTC1P50748 2209 aa10.47□□□□□ -0.73
CARMIL3-202ENST00000559694 URADA6NGE7 173 aa10.46□□□□□ -0.73
CARMIL3-202ENST00000559694 TRIM38O00635 465 aa10.46□□□□□ -0.73
CARMIL3-202ENST00000559694 GRID2O43424 1007 aa10.46□□□□□ -0.73
CARMIL3-202ENST00000559694 ERAL1O75616 437 aaKnown RBP10.46□□□□□ -0.73
CARMIL3-202ENST00000559694 IFNA16P05015 189 aa10.46□□□□□ -0.73
CARMIL3-202ENST00000559694 ANXA11P50995 505 aaKnown RBP10.46□□□□□ -0.73
CARMIL3-202ENST00000559694 RPL38P63173 70 aaKnown RBP10.46□□□□□ -0.73
CARMIL3-202ENST00000559694 NKX3-2P78367 333 aa10.46□□□□□ -0.73
CARMIL3-202ENST00000559694 TMEM115Q12893 351 aaPredicted RBP10.46□□□□□ -0.73
CARMIL3-202ENST00000559694 ACAP2Q15057 778 aa10.46□□□□□ -0.73
CARMIL3-202ENST00000559694 NADK2Q4G0N4 442 aa10.46□□□□□ -0.73
CARMIL3-202ENST00000559694 IGDCC3Q8IVU1 814 aa10.46□□□□□ -0.73
CARMIL3-202ENST00000559694 ADGRG2Q8IZP9 1017 aa10.46□□□□□ -0.73
CARMIL3-202ENST00000559694 KHSRPQ92945 711 aaKnown RBP eCLIP10.46□□□□□ -0.73
CARMIL3-202ENST00000559694 CIB1Q99828 191 aa10.46□□□□□ -0.73
CARMIL3-202ENST00000559694 EBF4Q9BQW3 602 aa10.46□□□□□ -0.73
CARMIL3-202ENST00000559694 RTKNQ9BST9 563 aa10.46□□□□□ -0.73
CARMIL3-202ENST00000559694 SLC25A23Q9BV35 468 aa10.46□□□□□ -0.73
CARMIL3-202ENST00000559694 CCDC177Q9NQR7 707 aaPredicted RBP10.46□□□□□ -0.73
CARMIL3-202ENST00000559694 TRNAU1APQ9NX07 287 aaKnown RBP10.46□□□□□ -0.73
CARMIL3-202ENST00000559694 NME7Q9Y5B8 376 aa10.46□□□□□ -0.73
CARMIL3-202ENST00000559694 TSPAN6O43657 245 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 ASNA1O43681 348 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 RNGTTO60942 597 aaKnown RBP10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 TNFP01375 233 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 PGFP49763 221 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 PRKAG1P54619 331 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 RGS1Q08116 209 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 TDGQ13569 410 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 HNRNPA1L2Q32P51 320 aaKnown RBP10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 RBM20Q5T481 1227 aaKnown RBP10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 RSBN1Q5VWQ0 802 aaPredicted RBP10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 SIX5Q8N196 739 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 OTUB1Q96FW1 271 aaPredicted RBP10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 RNF145Q96MT1 663 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 PRICKLE1Q96MT3 831 aaPredicted RBP10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 ZNF778Q96MU6 729 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 BDH2Q9BUT1 245 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 YBX2Q9Y2T7 364 aaKnown RBP10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 NDUFAF1Q9Y375 327 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 PSME4Q14997 1843 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 NEMP2A6NFY4 417 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 PLIN3O60664 434 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 NTRK1P04629 796 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 COX7A2P14406 83 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 JAK1P23458 1154 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 PSMB9P28065 219 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 INAQ16352 499 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 NCEH1Q6PIU2 408 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 NXPE1Q8N323 547 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 OR9Q1Q8NGQ5 310 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 TFGQ92734 400 aaPredicted RBP10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 TRMOQ9BU70 441 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 NOL11Q9H8H0 719 aaKnown RBP10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 SGK2Q9HBY8 427 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 SLC2A4RGQ9NR83 387 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 ENTPD4Q9Y227 616 aa10.46□□□□□ -0.74
CARMIL3-202ENST00000559694 VPS4BO75351 444 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 GNAZP19086 355 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms