RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 PCDHB3Q9Y5E6 796 aa20.85■□□□□ 0.93
CRNDE-205ENST00000558952 SLC9B1P1A6NJY1 282 aa20.84■□□□□ 0.93
CRNDE-205ENST00000558952 PRMT5O14744 637 aaPredicted RBP20.84■□□□□ 0.93
CRNDE-205ENST00000558952 NKX2-8O15522 239 aa20.84■□□□□ 0.93
CRNDE-205ENST00000558952 TIAF1O95411 115 aa20.84■□□□□ 0.93
CRNDE-205ENST00000558952 FAM87AP0C7U9 286 aa20.84■□□□□ 0.93
CRNDE-205ENST00000558952 TCN2P20062 427 aa20.84■□□□□ 0.93
CRNDE-205ENST00000558952 ACADLP28330 430 aa20.84■□□□□ 0.93
CRNDE-205ENST00000558952 NMBRP28336 390 aa20.84■□□□□ 0.93
CRNDE-205ENST00000558952 HSPA14Q0VDF9 509 aa20.84■□□□□ 0.93
CRNDE-205ENST00000558952 CDC20Q12834 499 aa20.84■□□□□ 0.93
CRNDE-205ENST00000558952 TMED2Q15363 201 aa20.84■□□□□ 0.93
CRNDE-205ENST00000558952 PTRHD1Q6GMV3 140 aaKnown RBP20.84■□□□□ 0.93
CRNDE-205ENST00000558952 C16orf46Q6P387 395 aa20.84■□□□□ 0.93
CRNDE-205ENST00000558952 LDB1Q86U70 411 aaPredicted RBP20.84■□□□□ 0.93
CRNDE-205ENST00000558952 TMEM126BQ8IUX1 230 aa20.84■□□□□ 0.93
CRNDE-205ENST00000558952 MPP5Q8N3R9 675 aa20.84■□□□□ 0.93
CRNDE-205ENST00000558952 OR5K2Q8NHB8 316 aa20.84■□□□□ 0.93
CRNDE-205ENST00000558952 ASZ1Q8WWH4 475 aa20.84■□□□□ 0.93
CRNDE-205ENST00000558952 MS4A14Q96JA4 679 aa20.84■□□□□ 0.93
CRNDE-205ENST00000558952 PPM1MQ96MI6 270 aa20.84■□□□□ 0.93
CRNDE-205ENST00000558952 CARD6Q9BX69 1037 aa20.84■□□□□ 0.93
CRNDE-205ENST00000558952 AP1M1Q9BXS5 423 aa20.84■□□□□ 0.93
CRNDE-205ENST00000558952 MRM3Q9HC36 420 aaKnown RBP20.84■□□□□ 0.93
CRNDE-205ENST00000558952 KCND1Q9NSA2 647 aa20.84■□□□□ 0.93
CRNDE-205ENST00000558952 SYBUQ9NX95 663 aa20.84■□□□□ 0.93
CRNDE-205ENST00000558952 ACTR10Q9NZ32 417 aa20.84■□□□□ 0.93
CRNDE-205ENST00000558952 MARCH4Q9P2E8 410 aaPredicted RBP20.84■□□□□ 0.93
CRNDE-205ENST00000558952 ICKQ9UPZ9 632 aa20.84■□□□□ 0.93
CRNDE-205ENST00000558952 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.83■□□□□ 0.93
CRNDE-205ENST00000558952 PGRMC1O00264 195 aaKnown RBP20.83■□□□□ 0.93
CRNDE-205ENST00000558952 KIF5CO60282 957 aa20.83■□□□□ 0.93
CRNDE-205ENST00000558952 CPNE3O75131 537 aaKnown RBP20.83■□□□□ 0.93
CRNDE-205ENST00000558952 NDUFS3O75489 264 aa20.83■□□□□ 0.93
CRNDE-205ENST00000558952 SCRG1O75711 98 aa20.83■□□□□ 0.93
CRNDE-205ENST00000558952 NTRK1P04629 796 aa20.83■□□□□ 0.93
CRNDE-205ENST00000558952 APOA4P06727 396 aa20.83■□□□□ 0.93
CRNDE-205ENST00000558952 CCR7P32248 378 aa20.83■□□□□ 0.93
CRNDE-205ENST00000558952 CCR10P46092 362 aa20.83■□□□□ 0.93
CRNDE-205ENST00000558952 REXO1L1PQ8IX06 675 aa20.83■□□□□ 0.93
CRNDE-205ENST00000558952 SLC22A15Q8IZD6 547 aa20.83■□□□□ 0.93
CRNDE-205ENST00000558952 SLC35F6Q8N357 371 aa20.83■□□□□ 0.93
CRNDE-205ENST00000558952 GSDMBQ8TAX9 411 aa20.83■□□□□ 0.93
CRNDE-205ENST00000558952 ANP32BQ92688 251 aaKnown RBP20.83■□□□□ 0.93
CRNDE-205ENST00000558952 ZNF501Q96CX3 271 aaPredicted RBP20.83■□□□□ 0.93
CRNDE-205ENST00000558952 PANX3Q96QZ0 392 aa20.83■□□□□ 0.93
CRNDE-205ENST00000558952 KIFC1Q9BW19 673 aa20.83■□□□□ 0.93
CRNDE-205ENST00000558952 SYTL2Q9HCH5 934 aa20.83■□□□□ 0.93
CRNDE-205ENST00000558952 LHX9Q9NQ69 397 aa20.83■□□□□ 0.93
CRNDE-205ENST00000558952 GNPTGQ9UJJ9 305 aa20.83■□□□□ 0.93
CRNDE-205ENST00000558952 TCRBV7S3A2A0A539 114 aa20.82■□□□□ 0.92
CRNDE-205ENST00000558952 PIPSLA2A3N6 862 aa20.82■□□□□ 0.92
CRNDE-205ENST00000558952 BHMG1C9JSJ3 638 aaPredicted RBP20.82■□□□□ 0.92
CRNDE-205ENST00000558952 PFDN6O15212 129 aa20.82■□□□□ 0.92
CRNDE-205ENST00000558952 KATNA1O75449 491 aa20.82■□□□□ 0.92
CRNDE-205ENST00000558952 RPN2P04844 631 aa20.82■□□□□ 0.92
CRNDE-205ENST00000558952 KCNJ11Q14654 390 aa20.82■□□□□ 0.92
CRNDE-205ENST00000558952 CRTC2Q53ET0 693 aaPredicted RBP20.82■□□□□ 0.92
CRNDE-205ENST00000558952 DNAJC21Q5F1R6 531 aaKnown RBP20.82■□□□□ 0.92
CRNDE-205ENST00000558952 MRNIPQ6NTE8 343 aa20.82■□□□□ 0.92
CRNDE-205ENST00000558952 TTC27Q6P3X3 843 aa20.82■□□□□ 0.92
CRNDE-205ENST00000558952 CCDC137Q6PK04 289 aaKnown RBP20.82■□□□□ 0.92
CRNDE-205ENST00000558952 SDCCAG8Q86SQ7 713 aaPredicted RBP20.82■□□□□ 0.92
CRNDE-205ENST00000558952 LRRC6Q86X45 466 aa20.82■□□□□ 0.92
CRNDE-205ENST00000558952 ADGRF3Q8IZF5 1079 aa20.82■□□□□ 0.92
CRNDE-205ENST00000558952 PITPNM3Q9BZ71 974 aa20.82■□□□□ 0.92
CRNDE-205ENST00000558952 LATS2Q9NRM7 1088 aa20.82■□□□□ 0.92
CRNDE-205ENST00000558952 SAMD15Q9P1V8 674 aa20.82■□□□□ 0.92
CRNDE-205ENST00000558952 SOX13Q9UN79 622 aa20.82■□□□□ 0.92
CRNDE-205ENST00000558952 MRPS18BQ9Y676 258 aaKnown RBP20.82■□□□□ 0.92
CRNDE-205ENST00000558952 ATRXP46100 2492 aa20.81■□□□□ 0.92
CRNDE-205ENST00000558952 GOLGA6L10A0A0M3HER8 536 aa20.81■□□□□ 0.92
CRNDE-205ENST00000558952 IQCF5A8MTL0 148 aa20.81■□□□□ 0.92
CRNDE-205ENST00000558952 B8ZZF3 427 aa20.81■□□□□ 0.92
CRNDE-205ENST00000558952 VAPBO95292 243 aa20.81■□□□□ 0.92
CRNDE-205ENST00000558952 ST6GAL1P15907 406 aa20.81■□□□□ 0.92
CRNDE-205ENST00000558952 PAMP19021 973 aa20.81■□□□□ 0.92
CRNDE-205ENST00000558952 COILP38432 576 aaPredicted RBP20.81■□□□□ 0.92
CRNDE-205ENST00000558952 DNASE1L3Q13609 305 aa20.81■□□□□ 0.92
CRNDE-205ENST00000558952 KCTD19Q17RG1 926 aaPredicted RBP20.81■□□□□ 0.92
CRNDE-205ENST00000558952 ARMC3Q5W041 872 aa20.81■□□□□ 0.92
CRNDE-205ENST00000558952 CASC4Q6P4E1 433 aa20.81■□□□□ 0.92
CRNDE-205ENST00000558952 SPESP1Q6UW49 350 aa20.81■□□□□ 0.92
CRNDE-205ENST00000558952 UNC5AQ6ZN44 842 aa20.81■□□□□ 0.92
CRNDE-205ENST00000558952 GRK7Q8WTQ7 553 aa20.81■□□□□ 0.92
CRNDE-205ENST00000558952 MFSD3Q96ES6 412 aa20.81■□□□□ 0.92
CRNDE-205ENST00000558952 OSBPL9Q96SU4 736 aa20.81■□□□□ 0.92
CRNDE-205ENST00000558952 NRTNQ99748 197 aa20.81■□□□□ 0.92
CRNDE-205ENST00000558952 ADNPQ9H2P0 1102 aa20.81■□□□□ 0.92
CRNDE-205ENST00000558952 OR6C2Q9NZP2 312 aa20.81■□□□□ 0.92
CRNDE-205ENST00000558952 C21orf140B9A014 251 aa20.8■□□□□ 0.92
CRNDE-205ENST00000558952 KPNA5O15131 536 aa20.8■□□□□ 0.92
CRNDE-205ENST00000558952 GPC4O75487 556 aa20.8■□□□□ 0.92
CRNDE-205ENST00000558952 F8A1P23610 371 aa20.8■□□□□ 0.92
CRNDE-205ENST00000558952 MAGEA6P43360 314 aa20.8■□□□□ 0.92
CRNDE-205ENST00000558952 EIF3BP55884 814 aaKnown RBP20.8■□□□□ 0.92
CRNDE-205ENST00000558952 POLE2P56282 527 aa20.8■□□□□ 0.92
CRNDE-205ENST00000558952 NFATC3Q12968 1075 aa20.8■□□□□ 0.92
CRNDE-205ENST00000558952 CYP1B1Q16678 543 aa20.8■□□□□ 0.92
CRNDE-205ENST00000558952 RNF187Q5TA31 235 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms