RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 KRT87PA6NCN2 255 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 OR5K3A6NET4 321 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 CDRT15L2A8MXV6 281 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 HGSO14964 777 aaPredicted RBP13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 PRAMEF10O60809 474 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 RASSF9O75901 435 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 PIAS1O75925 651 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 DXOO77932 396 aaKnown RBP13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 ZIC2O95409 532 aaPredicted RBP13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 APOA4P06727 396 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 PGGT1BP53609 377 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 PLTPP55058 493 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 SH3BP2P78314 561 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 CKAP4Q07065 602 aaKnown RBP13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 EIF3IQ13347 325 aaKnown RBP13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 CACHD1Q5VU97 1274 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 ARMC3Q5W041 872 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 CAPN12Q6ZSI9 719 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 LRRC6Q86X45 466 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 ZFAND4Q86XD8 727 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 SLC22A15Q8IZD6 547 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 C2orf73Q8N5S3 287 aaPredicted RBP13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 SIDT2Q8NBJ9 832 aaKnown RBP13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 NOA1Q8NC60 698 aaKnown RBP13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 AGBL5Q8NDL9 886 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 ACVR1CQ8NER5 493 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 ASZ1Q8WWH4 475 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 LCN9Q8WX39 176 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 ART4Q93070 314 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 PANX3Q96QZ0 392 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 MAP3K3Q99759 626 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 TSSK1BQ9BXA7 367 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 EPB41L1Q9H4G0 881 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 MVB12BQ9H7P6 319 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 PPANQ9NQ55 473 aaKnown RBP13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 WDR70Q9NW82 654 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 WHRNQ9P202 907 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 ICKQ9UPZ9 632 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 MED16Q9Y2X0 877 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 HEBP2Q9Y5Z4 205 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 MRFAP1Q9Y605 127 aa13.44□□□□□ -0.26
TSPAN3-205ENST00000558745 IGHV5-51A0A0C4DH38 117 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 EIF4E1BA6NMX2 242 aaKnown RBP13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 E7ESA3 106 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 SMAPO00193 183 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 BTN3A1O00481 513 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 SLCO2B1O94956 709 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 ESR1P03372 595 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 ITGA2BP08514 1039 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 NDUFS1P28331 727 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 KPNA2P52292 529 aaKnown RBP13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 CALCOCO2Q13137 446 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 TGIF1Q15583 401 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 WHAMMP3Q1A5X7 153 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 CCSMST1Q4G0I0 132 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 SOWAHCQ53LP3 525 aaPredicted RBP13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 ACSBG2Q5FVE4 666 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 TEDDM1Q5T9Z0 273 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 RNF187Q5TA31 235 aaPredicted RBP13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 ANKS6Q68DC2 871 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 ZDHHC24Q6UX98 284 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 OTOAQ7RTW8 1153 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 ZBED8Q8IZ13 594 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 BMPERQ8N8U9 685 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 BBOF1Q8ND07 529 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 GIMAP7Q8NHV1 300 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 SKA2Q8WVK7 121 aaPredicted RBP13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 ZFPM2Q8WW38 1151 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 CERS2Q96G23 380 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 ZDHHC12Q96GR4 267 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 CRELD1Q96HD1 420 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 IL17FQ96PD4 163 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 NDNQ99608 321 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 SRMSQ9H3Y6 488 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 SAYSD1Q9NPB0 183 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 THSD1Q9NS62 852 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 INTS10Q9NVR2 710 aaKnown RBP13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 SLC39A1Q9NY26 324 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 AKAP7Q9P0M2 348 aaPredicted RBP13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 EPHA6Q9UF33 1036 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 UTP11Q9Y3A2 253 aaKnown RBP13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 B3GALT1Q9Y5Z6 326 aa13.43□□□□□ -0.26
TSPAN3-205ENST00000558745 F8W8V4 182 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 PFDN6O15212 129 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 TTC4O95801 387 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 AHSGP02765 367 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 BDKRB1P46663 353 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 CLCN7P51798 805 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 ADARP55265 1226 aaKnown RBP13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 ERVPABLB-1P60509 514 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 TIAL1Q01085 375 aaKnown RBP eCLIP13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 PLOD1Q02809 727 aaPredicted RBP13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 CUL1Q13616 776 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 GRB7Q14451 532 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 KCNAB1Q14722 419 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 TMED2Q15363 201 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 DNTTIP2Q5QJE6 756 aaKnown RBP13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 STEAP4Q687X5 459 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 IGF2-ASQ6U949 168 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 CLEC14AQ86T13 490 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms