RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 NXPE3Q969Y0 559 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 P2RY13Q9BPV8 354 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 PKD2L2Q9NZM6 624 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 LEF1Q9UJU2 399 aaPredicted RBP10.33□□□□□ -0.76
TPM1-210ENST00000558264 CCL27Q9Y4X3 112 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 A0A1B0GTW7 788 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 A0A1W2PQ67 120 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 FAM234BA2RU67 622 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 OTOL1A6NHN0 477 aaPredicted RBP10.33□□□□□ -0.76
TPM1-210ENST00000558264 PDLIM1O00151 329 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 ULK1O75385 1050 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 PGM3O95394 542 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 CYP17A1P05093 508 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 SLC7A1P30825 629 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 ABRQ12979 859 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 PTCHD3Q3KNS1 767 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 PRSS36Q5K4E3 855 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 IYDQ6PHW0 289 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 SUSD1Q6UWL2 747 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 AHI1Q8N157 1196 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 ADCY4Q8NFM4 1077 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 SEPHS2Q99611 448 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 CEP44Q9C0F1 390 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 PRM3Q9NNZ6 103 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 PFDN4Q9NQP4 134 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 SLC22A14Q9Y267 594 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 PPIL1Q9Y3C6 166 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 ZNF106Q9H2Y7 1883 aaKnown RBP10.33□□□□□ -0.76
TPM1-210ENST00000558264 DHRS12A0PJE2 317 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 CARNS1A5YM72 827 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 MANBAO00462 879 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 PDYNP01213 254 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 ZNF26P17031 533 aaPredicted RBP10.32□□□□□ -0.76
TPM1-210ENST00000558264 VIPR1P32241 457 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 NNMTP40261 264 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 SLC6A11P48066 632 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 DGKGP49619 791 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 CTSCP53634 463 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 OR4D2P58180 307 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 POLR2LP62875 67 aaKnown RBP10.32□□□□□ -0.76
TPM1-210ENST00000558264 EMX2Q04743 252 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 CYP51A1Q16850 503 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 FAM174BQ3ZCQ3 159 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 CCSMST1Q4G0I0 132 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 NEK5Q6P3R8 708 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 UGT2A3Q6UWM9 527 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 PIP4K2CQ8TBX8 421 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 GFM2Q969S9 779 aaKnown RBP10.32□□□□□ -0.76
TPM1-210ENST00000558264 HEBP1Q9NRV9 189 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 DUS2Q9NX74 493 aaKnown RBP10.32□□□□□ -0.76
TPM1-210ENST00000558264 ZIM2Q9NZV7 527 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 IL36AQ9UHA7 158 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 EYSQ5T1H1 3165 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 IGLV3-16A0A075B6K0 115 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 C16orf96A6NNT2 1141 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 SOCS2O14508 198 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 ANKRD28O15084 1053 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 TSPAN6O43657 245 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 DFNA5O60443 496 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 PRAMEF4O60810 478 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 XYLBO75191 536 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 MSH3P20585 1137 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 ACOX1Q15067 660 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 SF1Q15637 639 aaKnown RBP10.32□□□□□ -0.76
TPM1-210ENST00000558264 GTDC1Q4AE62 458 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 SPANXN4Q5MJ08 99 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 PRAMEF9Q5VWM5 478 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 PRMT9Q6P2P2 845 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 ZNF707Q96C28 371 aaPredicted RBP10.32□□□□□ -0.76
TPM1-210ENST00000558264 TMEM106CQ9BVX2 250 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 ACPTQ9BZG2 426 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 TBC1D14Q9P2M4 693 aa10.32□□□□□ -0.76
TPM1-210ENST00000558264 WASH3PC4AMC7 463 aa10.31□□□□□ -0.76
TPM1-210ENST00000558264 PRRT4C9JH25 899 aa10.31□□□□□ -0.76
TPM1-210ENST00000558264 RGS14O43566 566 aa10.31□□□□□ -0.76
TPM1-210ENST00000558264 SGTAO43765 313 aa10.31□□□□□ -0.76
TPM1-210ENST00000558264 LRATO95237 230 aa10.31□□□□□ -0.76
TPM1-210ENST00000558264 ADH5P11766 374 aa10.31□□□□□ -0.76
TPM1-210ENST00000558264 HSD17B1P14061 328 aa10.31□□□□□ -0.76
TPM1-210ENST00000558264 CHN2P52757 468 aa10.31□□□□□ -0.76
TPM1-210ENST00000558264 LBX1P52954 281 aa10.31□□□□□ -0.76
TPM1-210ENST00000558264 NAA20P61599 178 aa10.31□□□□□ -0.76
TPM1-210ENST00000558264 BRAT1Q6PJG6 821 aa10.31□□□□□ -0.76
TPM1-210ENST00000558264 PARS2Q7L3T8 475 aaKnown RBP10.31□□□□□ -0.76
TPM1-210ENST00000558264 SELENOMQ8WWX9 145 aa10.31□□□□□ -0.76
TPM1-210ENST00000558264 BTBD9Q96Q07 612 aa10.31□□□□□ -0.76
TPM1-210ENST00000558264 TRIM54Q9BYV2 358 aa10.31□□□□□ -0.76
TPM1-210ENST00000558264 LRTM1Q9HBL6 345 aa10.31□□□□□ -0.76
TPM1-210ENST00000558264 DLGAP4Q9Y2H0 992 aa10.31□□□□□ -0.76
TPM1-210ENST00000558264 ARHGAP10A1A4S6 786 aa10.31□□□□□ -0.76
TPM1-210ENST00000558264 TULP3O75386 442 aa10.31□□□□□ -0.76
TPM1-210ENST00000558264 CLDN9O95484 217 aa10.31□□□□□ -0.76
TPM1-210ENST00000558264 CA3P07451 260 aa10.31□□□□□ -0.76
TPM1-210ENST00000558264 HIST1H2AGP0C0S8 130 aaPredicted RBP10.31□□□□□ -0.76
TPM1-210ENST00000558264 ELFN1P0C7U0 828 aa10.31□□□□□ -0.76
TPM1-210ENST00000558264 ATP6V1B1P15313 513 aa10.31□□□□□ -0.76
TPM1-210ENST00000558264 HIST1H2ADP20671 130 aa10.31□□□□□ -0.76
TPM1-210ENST00000558264 DDX6P26196 483 aaKnown RBP eCLIP10.31□□□□□ -0.76
TPM1-210ENST00000558264 VARSP26640 1264 aaKnown RBP10.31□□□□□ -0.76
TPM1-210ENST00000558264 DDX39BQ13838 428 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms