RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 CARNMT1Q8N4J0 409 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 OR4L1Q8NH43 312 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 NANPQ8TBE9 248 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 RHOJQ9H4E5 214 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 FRMPD4Q14CM0 1322 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 TEX13CA0A0J9YWL9 993 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 A0A1W2PP18 115 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 CLIC1O00299 241 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 PSMB4P28070 264 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 CD47Q08722 323 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 ILF3Q12906 894 aaKnown RBP eCLIP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 NFE2Q16621 373 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 CLPPQ16740 277 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF484Q5JVG2 852 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 NCEH1Q6PIU2 408 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 C3P1Q6ZMU1 363 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 PPCDCQ96CD2 204 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 EIF2B4Q9UI10 523 aaKnown RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 RNF11Q9Y3C5 154 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 FAM86C2PA6NEL3 165 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 WWP2O00308 870 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 SOCS2O14508 198 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 SPARCP09486 303 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 TBX4P57082 545 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 HSPA14Q0VDF9 509 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 TEAD4Q15561 434 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 CELF3Q5SZQ8 465 aaKnown RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 REP15Q6BDI9 236 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF574Q6ZN55 896 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 NDNFQ8TB73 568 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF607Q96SK3 696 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 DPAGT1Q9H3H5 408 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 ABI2Q9NYB9 513 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 SCML2Q9UQR0 700 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 CACNA1BQ00975 2339 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 A8MUA0 341 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 TYROBPO43914 113 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 F7P08709 466 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 CHMP24386 653 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 PTPN11Q06124 597 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 OR5B17Q8NGF7 314 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 SETD6Q8TBK2 473 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 FCGR1BQ92637 280 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 PRMT6Q96LA8 375 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 EVA1BQ9NVM1 165 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 SDK1Q7Z5N4 2213 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 A0A1W2PRQ8 180 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 TTC24A2A3L6 582 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 MEIOCA2RUB1 952 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 CREG1O75629 220 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 RPS6KA4O75676 772 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 YWHAQP27348 245 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 GMPRP36959 345 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 CD86P42081 329 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 CYP27C1Q4G0S4 372 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF425Q6IV72 752 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 KIAA1161Q6NSJ0 714 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 ARL9Q6T311 187 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 CREB3L2Q70SY1 520 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 ZFPM1Q8IX07 1006 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 MIPEPQ99797 713 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 RANGRFQ9HD47 186 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 DMAC2Q9NW81 257 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 FBXW11Q9UKB1 542 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 RGS9O75916 674 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 PCSK1P29120 753 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 POLR2IP36954 125 aaKnown RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 RGS1Q08116 209 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 SPATS1Q496A3 300 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 ARMC6Q6NXE6 501 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 FAM196AQ6ZSG2 479 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 STRADAQ7RTN6 431 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 RELTQ969Z4 430 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 SEPT5Q99719 369 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 CPA4Q9UI42 421 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 PCDHGB1Q9Y5G3 927 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 PTH2RP49190 550 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 TAS2R39P59534 338 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 TGFB2P61812 414 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 SPIBQ01892 262 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 EFEMP1Q12805 493 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF705AQ6ZN79 300 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 AIF1LQ9BQI0 150 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 MANBAO00462 879 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 MATKP42679 507 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 CDH12P55289 794 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 EMX1Q04741 257 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 NFE2L1Q14494 772 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 PTGR1Q14914 329 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 RD3Q7Z3Z2 195 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 CCDC71Q8IV32 467 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 CCDC107Q8WV48 283 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 CPB2Q96IY4 423 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 GSX2Q9BZM3 304 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 hCG_1818297A0A087WSY0 165 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 ARPC2O15144 300 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 PQBP1O60828 265 aaKnown RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 B3GAT3O94766 335 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 ANXA4P09525 319 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 HPGDP15428 266 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms