RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 FBF1Q8TES7 1133 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 LCN9Q8WX39 176 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 SLC22A18Q96BI1 424 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 ACSS3Q9H6R3 686 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 PPCSQ9HAB8 311 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 FETUBQ9UGM5 382 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 MED16Q9Y2X0 877 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 MN1Q10571 1320 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-234ENST00000557703 A0A087WUV0 522 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-234ENST00000557703 ZNF839A8K0R7 811 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 SLC16A5O15375 505 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 ZBTB14O43829 449 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 C1QAP02745 245 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 C9P02748 559 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 CATP04040 527 aaKnown RBP13.32□□□□□ -0.28
SHMT2-234ENST00000557703 ANKRD34CP0C6C1 535 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 FDXRP22570 491 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 CNTFP26441 200 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 SLC26A3P40879 764 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 SLC12A2P55011 1212 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 INHBCP55103 352 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 IL2P60568 153 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 PRKAA1Q13131 559 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 SP140Q13342 867 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 PDAP1Q13442 181 aaKnown RBP13.32□□□□□ -0.28
SHMT2-234ENST00000557703 ARHGAP19Q14CB8 494 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 BRD3Q15059 726 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 PLCL1Q15111 1095 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 KBTBD12Q3ZCT8 623 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 MAP9Q49MG5 647 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 CCDC157Q569K6 752 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 HECTD2Q5U5R9 776 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 ARMC6Q6NXE6 501 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 KMT5CQ86Y97 462 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 SLITRK4Q8IW52 837 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 CTAGE3PQ8IX95 158 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 ASB11Q8WXH4 323 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 GPR21Q99679 349 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 GPR22Q99680 433 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 RBBP8Q99708 897 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 CMKLR1Q99788 373 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 CCDC77Q9BR77 488 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 CDC42EP4Q9H3Q1 356 aaKnown RBP13.32□□□□□ -0.28
SHMT2-234ENST00000557703 SRMSQ9H3Y6 488 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 NINJ2Q9NZG7 142 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 SEMA5BQ9P283 1151 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 FAM8A1Q9UBU6 413 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 IKBKGQ9Y6K9 419 aa13.32□□□□□ -0.28
SHMT2-234ENST00000557703 PTPRBP23467 1997 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 OR5K3A6NET4 321 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 GFYI3L273 518 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 PSIP1O75475 530 aaKnown RBP13.31□□□□□ -0.28
SHMT2-234ENST00000557703 C8GP07360 202 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 ITGB6P18564 788 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 SERPINB9P50453 376 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 RAB28P51157 221 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 FOXC1Q12948 553 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 AMZ1Q400G9 498 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 LGSNQ5TDP6 509 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 TAOK1Q7L7X3 1001 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 AMIGO1Q86WK6 493 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 GPATCH11Q8N954 259 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 WDR36Q8NI36 951 aaKnown RBP13.31□□□□□ -0.28
SHMT2-234ENST00000557703 HMGCLL1Q8TB92 370 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 LKAAEAR1Q8TD35 194 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 NAT14Q8WUY8 206 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 SKA2Q8WVK7 121 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-234ENST00000557703 NCSTNQ92542 709 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 SCNM1Q9BWG6 230 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 TWSG1Q9GZX9 223 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 SPATA7Q9P0W8 599 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 LNPEPQ9UIQ6 1025 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 ZNF180Q9UJW8 692 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 PCDHGA8Q9Y5G5 932 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 PSAT1Q9Y617 370 aa13.31□□□□□ -0.28
SHMT2-234ENST00000557703 TPRP12270 2363 aaKnown RBP13.3□□□□□ -0.28
SHMT2-234ENST00000557703 CCDC187A0A096LP49 1063 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 FAM95CA0A1B0GW59 222 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 MAP3K7O43318 606 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 HYAL3O43820 417 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-234ENST00000557703 CSO75390 466 aaKnown RBP13.3□□□□□ -0.28
SHMT2-234ENST00000557703 C1orf105O95561 183 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 ENO2P09104 434 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-234ENST00000557703 THRAP10827 490 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 STMN1P16949 149 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 MAP4P27816 1152 aaKnown RBP13.3□□□□□ -0.28
SHMT2-234ENST00000557703 CRABP2P29373 138 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 LSSP48449 732 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 PMS2P54278 862 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 ABRQ12979 859 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 TARDBPQ13148 414 aaKnown RBP eCLIP13.3□□□□□ -0.28
SHMT2-234ENST00000557703 KIR2DS3Q14952 304 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 NAA25Q14CX7 972 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 RTP5Q14D33 572 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 ACSBG2Q5FVE4 666 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 EMBQ6PCB8 327 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 CYHR1Q6ZMK1 362 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 CAPN12Q6ZSI9 719 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 MICALCLQ6ZW33 695 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 PRSS42Q7Z5A4 293 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms