RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 LRRC8DQ7L1W4 858 aa15.99■□□□□ 0.15
SHMT2-232ENST00000557487 RBM23Q86U06 439 aaKnown RBP15.99■□□□□ 0.15
SHMT2-232ENST00000557487 OR4F6Q8NGB9 312 aa15.99■□□□□ 0.15
SHMT2-232ENST00000557487 SLC35B4Q969S0 331 aa15.99■□□□□ 0.15
SHMT2-232ENST00000557487 RHBDF1Q96CC6 855 aa15.99■□□□□ 0.15
SHMT2-232ENST00000557487 CINPQ9BW66 212 aaPredicted RBP15.99■□□□□ 0.15
SHMT2-232ENST00000557487 DPY30Q9C005 99 aa15.99■□□□□ 0.15
SHMT2-232ENST00000557487 NACA2Q9H009 215 aa15.99■□□□□ 0.15
SHMT2-232ENST00000557487 ARMC7Q9H6L4 198 aa15.99■□□□□ 0.15
SHMT2-232ENST00000557487 TLR8Q9NR97 1041 aaKnown RBP15.99■□□□□ 0.15
SHMT2-232ENST00000557487 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.99■□□□□ 0.15
SHMT2-232ENST00000557487 FAM32AQ9Y421 112 aaKnown RBP15.99■□□□□ 0.15
SHMT2-232ENST00000557487 CCL27Q9Y4X3 112 aa15.99■□□□□ 0.15
SHMT2-232ENST00000557487 GPC6Q9Y625 555 aaPredicted RBP15.99■□□□□ 0.15
SHMT2-232ENST00000557487 TMEM247A6NEH6 219 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 OR7A17O14581 309 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 NOBOXO60393 691 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 NIPSNAP2O75323 286 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 INMTO95050 263 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 HTR6P50406 440 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 EMX1Q04741 257 aaPredicted RBP15.98■□□□□ 0.15
SHMT2-232ENST00000557487 MGAT3Q09327 533 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 PON2Q15165 354 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 NKG7Q16617 165 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 HABP4Q5JVS0 413 aaKnown RBP15.98■□□□□ 0.15
SHMT2-232ENST00000557487 MILR1Q7Z6M3 343 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 ELMOD1Q8N336 334 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 HASPINQ8TF76 798 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 YIPF6Q96EC8 236 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 ADGRE3Q9BY15 652 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 DUSP21Q9H596 190 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 UBA2Q9UBT2 640 aaPredicted RBP15.98■□□□□ 0.15
SHMT2-232ENST00000557487 INTS6Q9UL03 887 aaKnown RBP15.98■□□□□ 0.15
SHMT2-232ENST00000557487 INVSQ9Y283 1065 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 DHRS7Q9Y394 339 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 HTR3EA5X5Y0 456 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 AQP9O43315 295 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 JRKO75564 520 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 CREG1O75629 220 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 FKBP9O95302 570 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 ANGPTL1O95841 491 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 GLUD1P00367 558 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 SLC2A4P14672 509 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 TACR2P21452 398 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 AGXTP21549 392 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 TGM1P22735 817 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 HOXD9P28356 352 aaPredicted RBP15.98■□□□□ 0.15
SHMT2-232ENST00000557487 MC4RP32245 332 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 ARL1P40616 181 aaPredicted RBP15.98■□□□□ 0.15
SHMT2-232ENST00000557487 TRAF3Q13114 568 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 DSC3Q14574 896 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 RFTN2Q52LD8 501 aaPredicted RBP15.98■□□□□ 0.15
SHMT2-232ENST00000557487 P2RY8Q86VZ1 359 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 CALHM3Q86XJ0 350 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 LACC1Q8IV20 430 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 PLPP6Q8IY26 295 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 LGI2Q8N0V4 545 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 FAM86B1Q8N7N1 296 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 ZNF513Q8N8E2 541 aaPredicted RBP15.98■□□□□ 0.15
SHMT2-232ENST00000557487 MDGA1Q8NFP4 955 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 OR6Q1Q8NGQ2 317 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 CLMPQ9H6B4 373 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 RMND5AQ9H871 391 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 ASB1Q9Y576 335 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 PCDHB5Q9Y5E4 795 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 DGKBQ9Y6T7 804 aa15.98■□□□□ 0.15
SHMT2-232ENST00000557487 TRBV5-3A0A0A0MS03 114 aa15.97■□□□□ 0.15
SHMT2-232ENST00000557487 SLC12A8A0AV02 714 aa15.97■□□□□ 0.15
SHMT2-232ENST00000557487 ISPDA4D126 451 aa15.97■□□□□ 0.15
SHMT2-232ENST00000557487 F5H5T6 163 aa15.97■□□□□ 0.15
SHMT2-232ENST00000557487 TMEM189-UBE2V1I3L0A0 370 aa15.97■□□□□ 0.15
SHMT2-232ENST00000557487 GJB3O75712 270 aa15.97■□□□□ 0.15
SHMT2-232ENST00000557487 PGRP06401 933 aa15.97■□□□□ 0.15
SHMT2-232ENST00000557487 CR2P20023 1033 aa15.97■□□□□ 0.15
SHMT2-232ENST00000557487 MAGEA2P43356 314 aa15.97■□□□□ 0.15
SHMT2-232ENST00000557487 ST13P50502 369 aaKnown RBP15.97■□□□□ 0.15
SHMT2-232ENST00000557487 ARHGDIAP52565 204 aa15.97■□□□□ 0.15
SHMT2-232ENST00000557487 CAPN13Q6MZZ7 669 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-232ENST00000557487 CERS6Q6ZMG9 384 aa15.97■□□□□ 0.15
SHMT2-232ENST00000557487 TRIM46Q7Z4K8 759 aa15.97■□□□□ 0.15
SHMT2-232ENST00000557487 ADCK1Q86TW2 530 aa15.97■□□□□ 0.15
SHMT2-232ENST00000557487 MFSD4AQ8N468 514 aa15.97■□□□□ 0.15
SHMT2-232ENST00000557487 MCOLN3Q8TDD5 553 aa15.97■□□□□ 0.15
SHMT2-232ENST00000557487 SGCDQ92629 289 aa15.97■□□□□ 0.15
SHMT2-232ENST00000557487 FBXO32Q969P5 355 aa15.97■□□□□ 0.15
SHMT2-232ENST00000557487 PYURFQ96I23 114 aa15.97■□□□□ 0.15
SHMT2-232ENST00000557487 CDK15Q96Q40 435 aa15.97■□□□□ 0.15
SHMT2-232ENST00000557487 APOL4Q9BPW4 351 aa15.97■□□□□ 0.15
SHMT2-232ENST00000557487 CCDC90BQ9GZT6 254 aa15.97■□□□□ 0.15
SHMT2-232ENST00000557487 KAT8Q9H7Z6 458 aaKnown RBP15.97■□□□□ 0.15
SHMT2-232ENST00000557487 TMEFF2Q9UIK5 374 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-232ENST00000557487 PTGES3LE9PB15 166 aa15.96■□□□□ 0.15
SHMT2-232ENST00000557487 STX7O15400 261 aaKnown RBP15.96■□□□□ 0.15
SHMT2-232ENST00000557487 KDM1AO60341 852 aa15.96■□□□□ 0.15
SHMT2-232ENST00000557487 GNPDA1P46926 289 aa15.96■□□□□ 0.15
SHMT2-232ENST00000557487 CLCN7P51798 805 aa15.96■□□□□ 0.15
SHMT2-232ENST00000557487 IST1P53990 364 aa15.96■□□□□ 0.15
SHMT2-232ENST00000557487 RPL38P63173 70 aaKnown RBP15.96■□□□□ 0.15
SHMT2-232ENST00000557487 CSNK2BP67870 215 aa15.96■□□□□ 0.15
SHMT2-232ENST00000557487 CACNB2Q08289 660 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms