RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 NIPAL4Q0D2K0 466 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 ATP1A4Q13733 1029 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 TUBB2AQ13885 445 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 GPR19Q15760 415 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 PLEKHN1Q494U1 663 aaPredicted RBP5.71□□□□□ -1.5
VPS33B-207ENST00000557470 KHDC1Q4VXA5 237 aaKnown RBP5.71□□□□□ -1.5
VPS33B-207ENST00000557470 ANKRD20A8PQ5CZ79 823 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 FKBP15Q5T1M5 1219 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 PRAMEF17Q5VTA0 474 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 AGAP9Q5VTM2 703 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 IZUMO3Q5VZ72 239 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 ALS2CLQ60I27 953 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 TXNRD3NBQ6F5E7 133 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 CFAP161Q6P656 301 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 SHISA2Q6UWI4 295 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 ABRAXAS1Q6UWZ7 409 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 WASH2PQ6VEQ5 465 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 LRRTM4Q86VH4 590 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 HPS6Q86YV9 775 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 TMEM126BQ8IUX1 230 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 DMRTC2Q8IXT2 367 aaPredicted RBP5.71□□□□□ -1.5
VPS33B-207ENST00000557470 RBM12BQ8IXT5 1001 aaKnown RBP5.71□□□□□ -1.5
VPS33B-207ENST00000557470 IQCKQ8N0W5 287 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 NKAPQ8N5F7 415 aaKnown RBP5.71□□□□□ -1.5
VPS33B-207ENST00000557470 CISD2Q8N5K1 135 aaKnown RBP5.71□□□□□ -1.5
VPS33B-207ENST00000557470 ENDOVQ8N8Q3 282 aaKnown RBP5.71□□□□□ -1.5
VPS33B-207ENST00000557470 SLC38A9Q8NBW4 561 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 GPR26Q8NDV2 337 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 GPR150Q8NGU9 434 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 MR1Q95460 341 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 ZNF653Q96CK0 615 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 CXorf40BQ96DE9 158 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 TCF12Q99081 682 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 MAP3K3Q99759 626 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 TIMM29Q9BSF4 260 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 MLPHQ9BV36 600 aaPredicted RBP5.71□□□□□ -1.5
VPS33B-207ENST00000557470 TUBB2BQ9BVA1 445 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 SPATA16Q9BXB7 569 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 UNKQ9C0B0 810 aaKnown RBP5.71□□□□□ -1.5
VPS33B-207ENST00000557470 RAB33BQ9H082 229 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 CLSTN2Q9H4D0 955 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 PCDH9Q9HC56 1237 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 PCDH18Q9HCL0 1135 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 TRIM39Q9HCM9 518 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 WASH6PQ9NQA3 447 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 TPSG1Q9NRR2 321 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 GPR83Q9NYM4 423 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 SUCOQ9UBS9 1254 aaKnown RBP5.71□□□□□ -1.5
VPS33B-207ENST00000557470 TRIM10Q9UDY6 481 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 TCFL5Q9UL49 500 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 SNX7Q9UNH6 387 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 RPL26L1Q9UNX3 145 aaKnown RBP5.71□□□□□ -1.5
VPS33B-207ENST00000557470 WDR37Q9Y2I8 494 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 MTORP42345 2549 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 DCHS2Q6V1P9 2916 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 CROCCQ5TZA2 2017 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 CCDC168Q8NDH2 2452 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 ZFHX3Q15911 3703 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 DIDO1Q9BTC0 2240 aaKnown RBP5.7□□□□□ -1.5
VPS33B-207ENST00000557470 ARHGAP10A1A4S6 786 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 TLCD2A6NGC4 264 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 LGALS16A8MUM7 142 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 MATN3O15232 486 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 DDX3YO15523 660 aaKnown RBP5.7□□□□□ -1.5
VPS33B-207ENST00000557470 RGS9O75916 674 aaPredicted RBP5.7□□□□□ -1.5
VPS33B-207ENST00000557470 AGR2O95994 175 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 JCHAINP01591 159 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 SLC4A1P02730 911 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 HLA-DQB2P05538 268 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 MMP2P08253 660 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 RAB40ALP0C0E4 278 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 MYBL2P10244 700 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 RARAP10276 462 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 IDSP22304 550 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 CA4P22748 312 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 CD86P42081 329 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 ARL4DP49703 201 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 VAV2P52735 878 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 DCDC1P59894 354 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 SUMO1P63165 101 aaKnown RBP5.7□□□□□ -1.5
VPS33B-207ENST00000557470 HSD11B2P80365 405 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 GALNT2Q10471 571 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 BOLA3Q53S33 107 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 DNTTIP2Q5QJE6 756 aaKnown RBP5.7□□□□□ -1.5
VPS33B-207ENST00000557470 PLEKHS1Q5SXH7 462 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 C1QTNF12Q5T7M4 302 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 VWA5B1Q5TIE3 1220 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 FAM198BQ6UWH4 519 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 MED25Q71SY5 747 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 IRF2BP2Q7Z5L9 587 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 KMT5CQ86Y97 462 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 LRRC49Q8IUZ0 686 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 SLC34A3Q8N130 599 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 D2HGDHQ8N465 521 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 TAB3Q8N5C8 712 aaPredicted RBP5.7□□□□□ -1.5
VPS33B-207ENST00000557470 TRAM1L1Q8N609 369 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 ZBTB2Q8N680 514 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 TMEM102Q8N9M5 508 aaPredicted RBP5.7□□□□□ -1.5
VPS33B-207ENST00000557470 GLIS1Q8NBF1 620 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 OR2W6PQ8NHA6 318 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms