RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 ZNF197O14709 1029 aa3.66□□□□□ -1.82
VRK1-207ENST00000557352 OGG1O15527 345 aa3.66□□□□□ -1.82
VRK1-207ENST00000557352 CSRP3P50461 194 aa3.66□□□□□ -1.82
VRK1-207ENST00000557352 SP3Q02447 781 aa3.66□□□□□ -1.82
VRK1-207ENST00000557352 GAGE2BQ13066 116 aa3.66□□□□□ -1.82
VRK1-207ENST00000557352 PRKAA1Q13131 559 aa3.66□□□□□ -1.82
VRK1-207ENST00000557352 P2RY6Q15077 328 aa3.66□□□□□ -1.82
VRK1-207ENST00000557352 TBCEQ15813 527 aaPredicted RBP3.66□□□□□ -1.82
VRK1-207ENST00000557352 GAGE2EQ4V326 116 aa3.66□□□□□ -1.82
VRK1-207ENST00000557352 XKR6Q5GH73 641 aa3.66□□□□□ -1.82
VRK1-207ENST00000557352 FAM109BQ6ICB4 259 aaPredicted RBP3.66□□□□□ -1.82
VRK1-207ENST00000557352 GAGE2AQ6NT46 116 aa3.66□□□□□ -1.82
VRK1-207ENST00000557352 KLC3Q6P597 504 aa3.66□□□□□ -1.82
VRK1-207ENST00000557352 Q6ZSR9 355 aa3.66□□□□□ -1.82
VRK1-207ENST00000557352 GALNT13Q8IUC8 556 aa3.66□□□□□ -1.82
VRK1-207ENST00000557352 SMC5Q8IY18 1101 aa3.66□□□□□ -1.82
VRK1-207ENST00000557352 NGEFQ8N5V2 710 aa3.66□□□□□ -1.82
VRK1-207ENST00000557352 ZNF383Q8NA42 475 aa3.66□□□□□ -1.82
VRK1-207ENST00000557352 NUDCD1Q96RS6 583 aa3.66□□□□□ -1.82
VRK1-207ENST00000557352 OLFML3Q9NRN5 406 aa3.66□□□□□ -1.82
VRK1-207ENST00000557352 GAGE2DQ9UEU5 116 aa3.66□□□□□ -1.82
VRK1-207ENST00000557352 SLC7A7Q9UM01 511 aa3.66□□□□□ -1.82
VRK1-207ENST00000557352 ARHGEF28Q8N1W1 1705 aaKnown RBP3.66□□□□□ -1.82
VRK1-207ENST00000557352 ERVK-7P63135 1459 aa3.66□□□□□ -1.82
VRK1-207ENST00000557352 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.82
VRK1-207ENST00000557352 DNM1LO00429 736 aa3.65□□□□□ -1.83
VRK1-207ENST00000557352 SCAMP1O15126 338 aa3.65□□□□□ -1.83
VRK1-207ENST00000557352 MOCS3O95396 460 aa3.65□□□□□ -1.83
VRK1-207ENST00000557352 EIF2S1P05198 315 aaKnown RBP3.65□□□□□ -1.83
VRK1-207ENST00000557352 CLEC3BP05452 202 aa3.65□□□□□ -1.83
VRK1-207ENST00000557352 H1F0P07305 194 aaKnown RBP3.65□□□□□ -1.83
VRK1-207ENST00000557352 ATP1A3P13637 1013 aa3.65□□□□□ -1.83
VRK1-207ENST00000557352 NFKBIAP25963 317 aa3.65□□□□□ -1.83
VRK1-207ENST00000557352 CCR9P51686 369 aa3.65□□□□□ -1.83
VRK1-207ENST00000557352 SNX16P57768 344 aa3.65□□□□□ -1.83
VRK1-207ENST00000557352 RPS3AP61247 264 aaKnown RBP3.65□□□□□ -1.83
VRK1-207ENST00000557352 RPS18P62269 152 aaKnown RBP3.65□□□□□ -1.83
VRK1-207ENST00000557352 CTU2Q2VPK5 515 aaKnown RBP3.65□□□□□ -1.83
VRK1-207ENST00000557352 TMEM95Q3KNT9 176 aa3.65□□□□□ -1.83
VRK1-207ENST00000557352 SNAI3Q3KNW1 292 aa3.65□□□□□ -1.83
VRK1-207ENST00000557352 TMEM198Q66K66 360 aa3.65□□□□□ -1.83
VRK1-207ENST00000557352 ACSM2BQ68CK6 577 aa3.65□□□□□ -1.83
VRK1-207ENST00000557352 P2RY8Q86VZ1 359 aa3.65□□□□□ -1.83
VRK1-207ENST00000557352 DNAJC22Q8N4W6 341 aa3.65□□□□□ -1.83
VRK1-207ENST00000557352 C1orf74Q96LT6 269 aa3.65□□□□□ -1.83
VRK1-207ENST00000557352 PCNX3Q9H6A9 2034 aa3.65□□□□□ -1.83
VRK1-207ENST00000557352 IGLV7-46A0A075B6I9 117 aa3.64□□□□□ -1.83
VRK1-207ENST00000557352 ACP2P11117 423 aa3.64□□□□□ -1.83
VRK1-207ENST00000557352 GATA1P15976 413 aaPredicted RBP3.64□□□□□ -1.83
VRK1-207ENST00000557352 NKX2-1P43699 371 aaPredicted RBP3.64□□□□□ -1.83
VRK1-207ENST00000557352 LGALS3BPQ08380 585 aa3.64□□□□□ -1.83
VRK1-207ENST00000557352 EIF4A2Q14240 407 aaKnown RBP3.64□□□□□ -1.83
VRK1-207ENST00000557352 MED22Q15528 200 aa3.64□□□□□ -1.83
VRK1-207ENST00000557352 PCGF3Q3KNV8 242 aa3.64□□□□□ -1.83
VRK1-207ENST00000557352 CYP4A22Q5TCH4 519 aa3.64□□□□□ -1.83
VRK1-207ENST00000557352 TRIM65Q6PJ69 517 aa3.64□□□□□ -1.83
VRK1-207ENST00000557352 EXOC8Q8IYI6 725 aa3.64□□□□□ -1.83
VRK1-207ENST00000557352 TMEM178AQ8NBL3 297 aa3.64□□□□□ -1.83
VRK1-207ENST00000557352 ZNRF4Q8WWF5 429 aa3.64□□□□□ -1.83
VRK1-207ENST00000557352 ARHGEF2Q92974 986 aaKnown RBP3.64□□□□□ -1.83
VRK1-207ENST00000557352 ZNF582Q96NG8 517 aaPredicted RBP3.64□□□□□ -1.83
VRK1-207ENST00000557352 SLC22A12Q96S37 553 aa3.64□□□□□ -1.83
VRK1-207ENST00000557352 SYT15Q9BQS2 421 aa3.64□□□□□ -1.83
VRK1-207ENST00000557352 FGFBP2Q9BYJ0 223 aa3.64□□□□□ -1.83
VRK1-207ENST00000557352 LAT2Q9GZY6 243 aa3.64□□□□□ -1.83
VRK1-207ENST00000557352 SLA2Q9H6Q3 261 aa3.64□□□□□ -1.83
VRK1-207ENST00000557352 SETD4Q9NVD3 440 aa3.64□□□□□ -1.83
VRK1-207ENST00000557352 EHD2Q9NZN4 543 aa3.64□□□□□ -1.83
VRK1-207ENST00000557352 NLRP1Q9C000 1473 aa3.64□□□□□ -1.83
VRK1-207ENST00000557352 QRICH2Q9H0J4 1663 aa3.64□□□□□ -1.83
VRK1-207ENST00000557352 RPGRIP1LQ68CZ1 1315 aa3.64□□□□□ -1.83
VRK1-207ENST00000557352 ADGRB1O14514 1584 aa3.63□□□□□ -1.83
VRK1-207ENST00000557352 NRXN3Q9Y4C0 1643 aa3.63□□□□□ -1.83
VRK1-207ENST00000557352 PIK3C2GO75747 1445 aa3.63□□□□□ -1.83
VRK1-207ENST00000557352 MYOM1P52179 1685 aa3.63□□□□□ -1.83
VRK1-207ENST00000557352 RIMS1Q86UR5 1692 aaKnown RBP3.63□□□□□ -1.83
VRK1-207ENST00000557352 A0A1B0GVC2 190 aa3.63□□□□□ -1.83
VRK1-207ENST00000557352 GPC4O75487 556 aa3.63□□□□□ -1.83
VRK1-207ENST00000557352 TMEM11P17152 192 aa3.63□□□□□ -1.83
VRK1-207ENST00000557352 AZU1P20160 251 aa3.63□□□□□ -1.83
VRK1-207ENST00000557352 PSMC4P43686 418 aa3.63□□□□□ -1.83
VRK1-207ENST00000557352 GPR17Q13304 367 aa3.63□□□□□ -1.83
VRK1-207ENST00000557352 RRS1Q15050 365 aaKnown RBP3.63□□□□□ -1.83
VRK1-207ENST00000557352 TEAD2Q15562 447 aa3.63□□□□□ -1.83
VRK1-207ENST00000557352 TSTQ16762 297 aaKnown RBP3.63□□□□□ -1.83
VRK1-207ENST00000557352 ZSCAN23Q3MJ62 389 aa3.63□□□□□ -1.83
VRK1-207ENST00000557352 NCEH1Q6PIU2 408 aa3.63□□□□□ -1.83
VRK1-207ENST00000557352 AMER3Q8N944 861 aa3.63□□□□□ -1.83
VRK1-207ENST00000557352 OLIG1Q8TAK6 271 aa3.63□□□□□ -1.83
VRK1-207ENST00000557352 RFFLQ8WZ73 363 aa3.63□□□□□ -1.83
VRK1-207ENST00000557352 ELMOD3Q96FG2 381 aa3.63□□□□□ -1.83
VRK1-207ENST00000557352 TBATAQ96M53 351 aa3.63□□□□□ -1.83
VRK1-207ENST00000557352 AGAP3Q96P47 875 aa3.63□□□□□ -1.83
VRK1-207ENST00000557352 GAD1Q99259 594 aa3.63□□□□□ -1.83
VRK1-207ENST00000557352 PKP2Q99959 881 aa3.63□□□□□ -1.83
VRK1-207ENST00000557352 INTS9Q9NV88 658 aaKnown RBP3.63□□□□□ -1.83
VRK1-207ENST00000557352 FLRT3Q9NZU0 649 aa3.63□□□□□ -1.83
VRK1-207ENST00000557352 DIP2AQ14689 1571 aa3.63□□□□□ -1.83
VRK1-207ENST00000557352 SLIT1O75093 1534 aa3.62□□□□□ -1.83
VRK1-207ENST00000557352 DLC1Q96QB1 1528 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms