RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 ABRQ12979 859 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 KLF1Q13351 362 aaPredicted RBP15.4■□□□□ 0.06
TUBB3-213ENST00000557262 DBN1Q16643 649 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 ZNF789Q5FWF6 425 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 CLEC18BQ6UXF7 455 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 MICALCLQ6ZW33 695 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 LINC00523Q86TU6 105 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 PIANPQ8IYJ0 282 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 ENDOVQ8N8Q3 282 aaKnown RBP15.4■□□□□ 0.06
TUBB3-213ENST00000557262 CLEC18CQ8NCF0 446 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 SLC35B2Q8TB61 432 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 ADAMTS17Q8TE56 1095 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 TMEM121Q9BTD3 319 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 SLC7A5P2Q9GIP4 190 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 XKR8Q9H6D3 395 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 MLXIPLQ9NP71 852 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 PCMTD2Q9NV79 361 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 ACTR10Q9NZ32 417 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 TCFL5Q9UL49 500 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 SNX7Q9UNH6 387 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 MROH6A6NGR9 719 aa15.39■□□□□ 0.05
TUBB3-213ENST00000557262 CAPN1P07384 714 aa15.39■□□□□ 0.05
TUBB3-213ENST00000557262 HBQ1P09105 142 aa15.39■□□□□ 0.05
TUBB3-213ENST00000557262 PVRP15151 417 aa15.39■□□□□ 0.05
TUBB3-213ENST00000557262 PGDP52209 483 aa15.39■□□□□ 0.05
TUBB3-213ENST00000557262 GDF10P55107 478 aa15.39■□□□□ 0.05
TUBB3-213ENST00000557262 KIF5AQ12840 1032 aa15.39■□□□□ 0.05
TUBB3-213ENST00000557262 CHAF1BQ13112 559 aa15.39■□□□□ 0.05
TUBB3-213ENST00000557262 ITIH4Q14624 930 aa15.39■□□□□ 0.05
TUBB3-213ENST00000557262 CPZQ66K79 652 aa15.39■□□□□ 0.05
TUBB3-213ENST00000557262 HOOK3Q86VS8 718 aa15.39■□□□□ 0.05
TUBB3-213ENST00000557262 DPH2Q9BQC3 489 aaPredicted RBP15.39■□□□□ 0.05
TUBB3-213ENST00000557262 HGH1Q9BTY7 390 aa15.39■□□□□ 0.05
TUBB3-213ENST00000557262 KLHL25Q9H0H3 589 aa15.39■□□□□ 0.05
TUBB3-213ENST00000557262 PIH1D1Q9NWS0 290 aaKnown RBP15.39■□□□□ 0.05
TUBB3-213ENST00000557262 POLG2Q9UHN1 485 aa15.39■□□□□ 0.05
TUBB3-213ENST00000557262 PACSIN2Q9UNF0 486 aaPredicted RBP15.39■□□□□ 0.05
TUBB3-213ENST00000557262 PRSS21Q9Y6M0 314 aa15.39■□□□□ 0.05
TUBB3-213ENST00000557262 SPENQ96T58 3664 aaKnown RBP15.38■□□□□ 0.05
TUBB3-213ENST00000557262 TTLL8A6PVC2 850 aa15.38■□□□□ 0.05
TUBB3-213ENST00000557262 E7EQ34 232 aa15.38■□□□□ 0.05
TUBB3-213ENST00000557262 ZNF749O43361 778 aa15.38■□□□□ 0.05
TUBB3-213ENST00000557262 AGXTP21549 392 aa15.38■□□□□ 0.05
TUBB3-213ENST00000557262 MSNP26038 577 aaKnown RBP15.38■□□□□ 0.05
TUBB3-213ENST00000557262 ACADLP28330 430 aa15.38■□□□□ 0.05
TUBB3-213ENST00000557262 STIP1P31948 543 aaKnown RBP15.38■□□□□ 0.05
TUBB3-213ENST00000557262 PTGIRP43119 386 aa15.38■□□□□ 0.05
TUBB3-213ENST00000557262 ITGA1P56199 1179 aa15.38■□□□□ 0.05
TUBB3-213ENST00000557262 PAPD7Q5XG87 772 aaKnown RBP15.38■□□□□ 0.05
TUBB3-213ENST00000557262 SPESP1Q6UW49 350 aa15.38■□□□□ 0.05
TUBB3-213ENST00000557262 UNC5AQ6ZN44 842 aa15.38■□□□□ 0.05
TUBB3-213ENST00000557262 CDHR3Q6ZTQ4 885 aa15.38■□□□□ 0.05
TUBB3-213ENST00000557262 SYTL1Q8IYJ3 562 aa15.38■□□□□ 0.05
TUBB3-213ENST00000557262 TBC1D21Q8IYX1 336 aa15.38■□□□□ 0.05
TUBB3-213ENST00000557262 TXLNBQ8N3L3 684 aa15.38■□□□□ 0.05
TUBB3-213ENST00000557262 FAM26EQ8N5C1 309 aa15.38■□□□□ 0.05
TUBB3-213ENST00000557262 TAB3Q8N5C8 712 aaPredicted RBP15.38■□□□□ 0.05
TUBB3-213ENST00000557262 ELMO1Q92556 727 aa15.38■□□□□ 0.05
TUBB3-213ENST00000557262 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.38■□□□□ 0.05
TUBB3-213ENST00000557262 BAG1Q99933 345 aaPredicted RBP15.38■□□□□ 0.05
TUBB3-213ENST00000557262 RBSNQ9H1K0 784 aa15.38■□□□□ 0.05
TUBB3-213ENST00000557262 ICKQ9UPZ9 632 aa15.38■□□□□ 0.05
TUBB3-213ENST00000557262 ASF1AQ9Y294 204 aa15.38■□□□□ 0.05
TUBB3-213ENST00000557262 R3HDM2Q9Y2K5 976 aaKnown RBP15.38■□□□□ 0.05
TUBB3-213ENST00000557262 PCDHGB7Q9Y5F8 929 aa15.38■□□□□ 0.05
TUBB3-213ENST00000557262 TCRBV7S2A1N4TA0A589 114 aa15.37■□□□□ 0.05
TUBB3-213ENST00000557262 CCDC78A2IDD5 438 aa15.37■□□□□ 0.05
TUBB3-213ENST00000557262 ERI2A8K979 691 aaKnown RBP15.37■□□□□ 0.05
TUBB3-213ENST00000557262 CEACAM4O75871 244 aa15.37■□□□□ 0.05
TUBB3-213ENST00000557262 TMEM63AO94886 807 aa15.37■□□□□ 0.05
TUBB3-213ENST00000557262 FTCDO95954 541 aa15.37■□□□□ 0.05
TUBB3-213ENST00000557262 GAS8O95995 478 aa15.37■□□□□ 0.05
TUBB3-213ENST00000557262 FTH1P02794 183 aa15.37■□□□□ 0.05
TUBB3-213ENST00000557262 FOXN2P32314 431 aa15.37■□□□□ 0.05
TUBB3-213ENST00000557262 SHMT2P34897 504 aa15.37■□□□□ 0.05
TUBB3-213ENST00000557262 PLOD1Q02809 727 aaPredicted RBP15.37■□□□□ 0.05
TUBB3-213ENST00000557262 CDH17Q12864 832 aa15.37■□□□□ 0.05
TUBB3-213ENST00000557262 BRD3Q15059 726 aa15.37■□□□□ 0.05
TUBB3-213ENST00000557262 PTCHD3Q3KNS1 767 aa15.37■□□□□ 0.05
TUBB3-213ENST00000557262 PACS1Q6VY07 963 aa15.37■□□□□ 0.05
TUBB3-213ENST00000557262 MED25Q71SY5 747 aa15.37■□□□□ 0.05
TUBB3-213ENST00000557262 GPR135Q8IZ08 494 aa15.37■□□□□ 0.05
TUBB3-213ENST00000557262 TMEM102Q8N9M5 508 aaPredicted RBP15.37■□□□□ 0.05
TUBB3-213ENST00000557262 DNAAF3Q8N9W5 541 aa15.37■□□□□ 0.05
TUBB3-213ENST00000557262 OR52K1Q8NGK4 314 aa15.37■□□□□ 0.05
TUBB3-213ENST00000557262 OR5AR1Q8NGP9 310 aa15.37■□□□□ 0.05
TUBB3-213ENST00000557262 N4BP2L2Q92802 583 aaPredicted RBP15.37■□□□□ 0.05
TUBB3-213ENST00000557262 TCTN2Q96GX1 697 aa15.37■□□□□ 0.05
TUBB3-213ENST00000557262 TTC1Q99614 292 aa15.37■□□□□ 0.05
TUBB3-213ENST00000557262 FAM60AQ9NP50 221 aa15.37■□□□□ 0.05
TUBB3-213ENST00000557262 ZNF451Q9Y4E5 1061 aa15.37■□□□□ 0.05
TUBB3-213ENST00000557262 SPTBP11277 2137 aa15.37■□□□□ 0.05
TUBB3-213ENST00000557262 LRRK2Q5S007 2527 aa15.36■□□□□ 0.05
TUBB3-213ENST00000557262 SLC5A10A0PJK1 596 aa15.36■□□□□ 0.05
TUBB3-213ENST00000557262 CCDC162PA2VCL2 907 aa15.36■□□□□ 0.05
TUBB3-213ENST00000557262 OR51F1A6NGY5 319 aa15.36■□□□□ 0.05
TUBB3-213ENST00000557262 BHMG1C9JSJ3 638 aaPredicted RBP15.36■□□□□ 0.05
TUBB3-213ENST00000557262 VPS4BO75351 444 aa15.36■□□□□ 0.05
TUBB3-213ENST00000557262 OR56A5P0C7T3 313 aa15.36■□□□□ 0.05
TUBB3-213ENST00000557262 UGT2B7P16662 529 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms