RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 ARL4CP56559 192 aa22.22■■□□□ 1.15
TDP1-216ENST00000556867 ZNF789Q5FWF6 425 aa22.22■■□□□ 1.15
TDP1-216ENST00000556867 SPANXN3Q5MJ09 141 aa22.22■■□□□ 1.15
TDP1-216ENST00000556867 DNTTIP2Q5QJE6 756 aaKnown RBP22.22■■□□□ 1.15
TDP1-216ENST00000556867 ARMC6Q6NXE6 501 aa22.22■■□□□ 1.15
TDP1-216ENST00000556867 OTOAQ7RTW8 1153 aa22.22■■□□□ 1.15
TDP1-216ENST00000556867 KCNMB4Q86W47 210 aa22.22■■□□□ 1.15
TDP1-216ENST00000556867 IGDCC3Q8IVU1 814 aa22.22■■□□□ 1.15
TDP1-216ENST00000556867 BBOF1Q8ND07 529 aa22.22■■□□□ 1.15
TDP1-216ENST00000556867 PMEPA1Q969W9 287 aa22.22■■□□□ 1.15
TDP1-216ENST00000556867 PWWP2AQ96N64 755 aa22.22■■□□□ 1.15
TDP1-216ENST00000556867 ERP44Q9BS26 406 aa22.22■■□□□ 1.15
TDP1-216ENST00000556867 FBXO8Q9NRD0 319 aa22.22■■□□□ 1.15
TDP1-216ENST00000556867 POLG2Q9UHN1 485 aa22.22■■□□□ 1.15
TDP1-216ENST00000556867 SNX24Q9Y343 169 aa22.22■■□□□ 1.15
TDP1-216ENST00000556867 NIPSNAP2O75323 286 aa22.21■■□□□ 1.15
TDP1-216ENST00000556867 PKMP14618 531 aaKnown RBP22.21■■□□□ 1.15
TDP1-216ENST00000556867 SEPHS1P49903 392 aa22.21■■□□□ 1.15
TDP1-216ENST00000556867 MRPS25P82663 173 aaKnown RBP22.21■■□□□ 1.15
TDP1-216ENST00000556867 TLE3Q04726 772 aa22.21■■□□□ 1.15
TDP1-216ENST00000556867 CKAP4Q07065 602 aaKnown RBP22.21■■□□□ 1.15
TDP1-216ENST00000556867 PRKAA1Q13131 559 aa22.21■■□□□ 1.15
TDP1-216ENST00000556867 PRKG2Q13237 762 aa22.21■■□□□ 1.15
TDP1-216ENST00000556867 CTBP1Q13363 440 aa22.21■■□□□ 1.15
TDP1-216ENST00000556867 PLEKHS1Q5SXH7 462 aa22.21■■□□□ 1.15
TDP1-216ENST00000556867 UNC5BQ8IZJ1 945 aa22.21■■□□□ 1.15
TDP1-216ENST00000556867 CARFQ8N187 725 aa22.21■■□□□ 1.15
TDP1-216ENST00000556867 HNRNPLLQ8WVV9 542 aaKnown RBP22.21■■□□□ 1.15
TDP1-216ENST00000556867 SLC41A2Q96JW4 573 aa22.21■■□□□ 1.15
TDP1-216ENST00000556867 TEFMQ96QE5 360 aaKnown RBP22.21■■□□□ 1.15
TDP1-216ENST00000556867 WDR83Q9BRX9 315 aaKnown RBP22.21■■□□□ 1.15
TDP1-216ENST00000556867 ASPSCR1Q9BZE9 553 aa22.21■■□□□ 1.15
TDP1-216ENST00000556867 FBXO6Q9NRD1 293 aaPredicted RBP22.21■■□□□ 1.15
TDP1-216ENST00000556867 CDC23Q9UJX2 597 aa22.21■■□□□ 1.15
TDP1-216ENST00000556867 FBXO5Q9UKT4 447 aa22.21■■□□□ 1.15
TDP1-216ENST00000556867 POMT2Q9UKY4 750 aa22.21■■□□□ 1.15
TDP1-216ENST00000556867 B3GALT1Q9Y5Z6 326 aa22.21■■□□□ 1.15
TDP1-216ENST00000556867 TEX264Q9Y6I9 313 aa22.21■■□□□ 1.15
TDP1-216ENST00000556867 CFAP47Q6ZTR5 3102 aa22.21■■□□□ 1.15
TDP1-216ENST00000556867 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.2■■□□□ 1.14
TDP1-216ENST00000556867 KRT37O76014 449 aa22.2■■□□□ 1.14
TDP1-216ENST00000556867 POLR2CP19387 275 aaPredicted RBP22.2■■□□□ 1.14
TDP1-216ENST00000556867 ELK3P41970 407 aa22.2■■□□□ 1.14
TDP1-216ENST00000556867 CBLBQ13191 982 aa22.2■■□□□ 1.14
TDP1-216ENST00000556867 CLN3Q13286 438 aa22.2■■□□□ 1.14
TDP1-216ENST00000556867 GBX1Q14549 363 aa22.2■■□□□ 1.14
TDP1-216ENST00000556867 HSP90AA5PQ58FG0 334 aa22.2■■□□□ 1.14
TDP1-216ENST00000556867 DCAF12Q5T6F0 453 aa22.2■■□□□ 1.14
TDP1-216ENST00000556867 ANKS6Q68DC2 871 aa22.2■■□□□ 1.14
TDP1-216ENST00000556867 UNC5DQ6UXZ4 953 aa22.2■■□□□ 1.14
TDP1-216ENST00000556867 AMIGO1Q86WK6 493 aa22.2■■□□□ 1.14
TDP1-216ENST00000556867 KMT5CQ86Y97 462 aa22.2■■□□□ 1.14
TDP1-216ENST00000556867 MAP3K3Q99759 626 aa22.2■■□□□ 1.14
TDP1-216ENST00000556867 PLAC1Q9HBJ0 212 aa22.2■■□□□ 1.14
TDP1-216ENST00000556867 LATS2Q9NRM7 1088 aa22.2■■□□□ 1.14
TDP1-216ENST00000556867 WHRNQ9P202 907 aa22.2■■□□□ 1.14
TDP1-216ENST00000556867 ICKQ9UPZ9 632 aa22.2■■□□□ 1.14
TDP1-216ENST00000556867 CHMP2BQ9UQN3 213 aa22.2■■□□□ 1.14
TDP1-216ENST00000556867 SSUH2Q9Y2M2 353 aa22.2■■□□□ 1.14
TDP1-216ENST00000556867 IGHV5-51A0A0C4DH38 117 aa22.19■■□□□ 1.14
TDP1-216ENST00000556867 E7ESA3 106 aa22.19■■□□□ 1.14
TDP1-216ENST00000556867 BTN3A3O00478 584 aa22.19■■□□□ 1.14
TDP1-216ENST00000556867 BTN3A1O00481 513 aa22.19■■□□□ 1.14
TDP1-216ENST00000556867 KLK10O43240 276 aa22.19■■□□□ 1.14
TDP1-216ENST00000556867 RPN2P04844 631 aa22.19■■□□□ 1.14
TDP1-216ENST00000556867 LIPCP11150 499 aa22.19■■□□□ 1.14
TDP1-216ENST00000556867 NELFEP18615 380 aaKnown RBP22.19■■□□□ 1.14
TDP1-216ENST00000556867 ATP5DP30049 168 aa22.19■■□□□ 1.14
TDP1-216ENST00000556867 SHMT2P34897 504 aa22.19■■□□□ 1.14
TDP1-216ENST00000556867 KPNA2P52292 529 aaKnown RBP22.19■■□□□ 1.14
TDP1-216ENST00000556867 STEAP4Q687X5 459 aa22.19■■□□□ 1.14
TDP1-216ENST00000556867 C19orf48Q6RUI8 117 aa22.19■■□□□ 1.14
TDP1-216ENST00000556867 CEACAM20Q6UY09 585 aa22.19■■□□□ 1.14
TDP1-216ENST00000556867 GABPB2Q8TAK5 448 aaPredicted RBP22.19■■□□□ 1.14
TDP1-216ENST00000556867 GSDMBQ8TAX9 411 aa22.19■■□□□ 1.14
TDP1-216ENST00000556867 NRTNQ99748 197 aa22.19■■□□□ 1.14
TDP1-216ENST00000556867 ZPBPQ9BS86 351 aa22.19■■□□□ 1.14
TDP1-216ENST00000556867 IARS2Q9NSE4 1012 aaKnown RBP22.19■■□□□ 1.14
TDP1-216ENST00000556867 ZC3H7BQ9UGR2 993 aaKnown RBP22.19■■□□□ 1.14
TDP1-216ENST00000556867 ITPR1Q14643 2758 aa22.19■■□□□ 1.14
TDP1-216ENST00000556867 KDM1AO60341 852 aa22.18■■□□□ 1.14
TDP1-216ENST00000556867 F7P08709 466 aaPredicted RBP22.18■■□□□ 1.14
TDP1-216ENST00000556867 TPBGLP0DKB5 382 aa22.18■■□□□ 1.14
TDP1-216ENST00000556867 ERVK-10P10266 1014 aa22.18■■□□□ 1.14
TDP1-216ENST00000556867 MPP1Q00013 466 aa22.18■■□□□ 1.14
TDP1-216ENST00000556867 ABRQ12979 859 aa22.18■■□□□ 1.14
TDP1-216ENST00000556867 CALCOCO2Q13137 446 aa22.18■■□□□ 1.14
TDP1-216ENST00000556867 COL28A1Q2UY09 1125 aa22.18■■□□□ 1.14
TDP1-216ENST00000556867 DUPD1Q68J44 220 aa22.18■■□□□ 1.14
TDP1-216ENST00000556867 UNC5AQ6ZN44 842 aa22.18■■□□□ 1.14
TDP1-216ENST00000556867 ZFAND4Q86XD8 727 aa22.18■■□□□ 1.14
TDP1-216ENST00000556867 DTX1Q86Y01 620 aa22.18■■□□□ 1.14
TDP1-216ENST00000556867 DCUN1D3Q8IWE4 304 aa22.18■■□□□ 1.14
TDP1-216ENST00000556867 CNTN4Q8IWV2 1026 aa22.18■■□□□ 1.14
TDP1-216ENST00000556867 ADGRF3Q8IZF5 1079 aa22.18■■□□□ 1.14
TDP1-216ENST00000556867 C2CD4AQ8NCU7 369 aaPredicted RBP22.18■■□□□ 1.14
TDP1-216ENST00000556867 CERS2Q96G23 380 aa22.18■■□□□ 1.14
TDP1-216ENST00000556867 TWSG1Q9GZX9 223 aa22.18■■□□□ 1.14
TDP1-216ENST00000556867 DPH5Q9H2P9 285 aa22.18■■□□□ 1.14
TDP1-216ENST00000556867 XKR8Q9H6D3 395 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms