RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 OR5K2Q8NHB8 316 aa17.02■□□□□ 0.32
SHMT2-225ENST00000556798 INPP5DQ92835 1189 aa17.02■□□□□ 0.32
SHMT2-225ENST00000556798 VPS39Q96JC1 886 aa17.02■□□□□ 0.32
SHMT2-225ENST00000556798 ELMO2Q96JJ3 720 aa17.02■□□□□ 0.32
SHMT2-225ENST00000556798 RHOJQ9H4E5 214 aa17.02■□□□□ 0.32
SHMT2-225ENST00000556798 TAS2R13Q9NYV9 303 aa17.02■□□□□ 0.32
SHMT2-225ENST00000556798 TXNDC16Q9P2K2 825 aa17.02■□□□□ 0.32
SHMT2-225ENST00000556798 KLHL3Q9UH77 587 aa17.02■□□□□ 0.32
SHMT2-225ENST00000556798 CORO1CQ9ULV4 474 aaPredicted RBP17.02■□□□□ 0.32
SHMT2-225ENST00000556798 PLAGL1Q9UM63 463 aa17.02■□□□□ 0.32
SHMT2-225ENST00000556798 DHRS7Q9Y394 339 aa17.02■□□□□ 0.32
SHMT2-225ENST00000556798 ENTPD2Q9Y5L3 495 aa17.02■□□□□ 0.32
SHMT2-225ENST00000556798 FAM155BO75949 473 aa17.01■□□□□ 0.31
SHMT2-225ENST00000556798 FDXRP22570 491 aa17.01■□□□□ 0.31
SHMT2-225ENST00000556798 ATP5DP30049 168 aa17.01■□□□□ 0.31
SHMT2-225ENST00000556798 PHBP35232 272 aa17.01■□□□□ 0.31
SHMT2-225ENST00000556798 CAPZBP47756 277 aa17.01■□□□□ 0.31
SHMT2-225ENST00000556798 INHBCP55103 352 aa17.01■□□□□ 0.31
SHMT2-225ENST00000556798 GFERP55789 205 aa17.01■□□□□ 0.31
SHMT2-225ENST00000556798 PPP1CAP62136 330 aa17.01■□□□□ 0.31
SHMT2-225ENST00000556798 KLHL38Q2WGJ6 581 aa17.01■□□□□ 0.31
SHMT2-225ENST00000556798 PHF19Q5T6S3 580 aa17.01■□□□□ 0.31
SHMT2-225ENST00000556798 FAM45BPQ6NSW5 357 aa17.01■□□□□ 0.31
SHMT2-225ENST00000556798 SLITRK4Q8IW52 837 aa17.01■□□□□ 0.31
SHMT2-225ENST00000556798 TBC1D21Q8IYX1 336 aa17.01■□□□□ 0.31
SHMT2-225ENST00000556798 OR4E2Q8NGC2 313 aa17.01■□□□□ 0.31
SHMT2-225ENST00000556798 UHMK1Q8TAS1 419 aaKnown RBP17.01■□□□□ 0.31
SHMT2-225ENST00000556798 FAM45AQ8TCE6 357 aa17.01■□□□□ 0.31
SHMT2-225ENST00000556798 ZFPM2Q8WW38 1151 aa17.01■□□□□ 0.31
SHMT2-225ENST00000556798 LCN9Q8WX39 176 aa17.01■□□□□ 0.31
SHMT2-225ENST00000556798 MRRFQ96E11 262 aaKnown RBP17.01■□□□□ 0.31
SHMT2-225ENST00000556798 CPNE1Q99829 537 aa17.01■□□□□ 0.31
SHMT2-225ENST00000556798 MCMBPQ9BTE3 642 aa17.01■□□□□ 0.31
SHMT2-225ENST00000556798 XKR8Q9H6D3 395 aa17.01■□□□□ 0.31
SHMT2-225ENST00000556798 ANGPTL2Q9UKU9 493 aa17.01■□□□□ 0.31
SHMT2-225ENST00000556798 VWA7Q9Y334 891 aa17.01■□□□□ 0.31
SHMT2-225ENST00000556798 NEUROG3Q9Y4Z2 214 aa17.01■□□□□ 0.31
SHMT2-225ENST00000556798 CEP295Q9C0D2 2601 aa17■□□□□ 0.31
SHMT2-225ENST00000556798 KRT87PA6NCN2 255 aa17■□□□□ 0.31
SHMT2-225ENST00000556798 GP5P40197 560 aa17■□□□□ 0.31
SHMT2-225ENST00000556798 PDAP1Q13442 181 aaKnown RBP17■□□□□ 0.31
SHMT2-225ENST00000556798 SQSTM1Q13501 440 aa17■□□□□ 0.31
SHMT2-225ENST00000556798 ZNF460Q14592 562 aa17■□□□□ 0.31
SHMT2-225ENST00000556798 SLMAPQ14BN4 828 aa17■□□□□ 0.31
SHMT2-225ENST00000556798 SNAP47Q5SQN1 464 aa17■□□□□ 0.31
SHMT2-225ENST00000556798 UGT3A1Q6NUS8 523 aa17■□□□□ 0.31
SHMT2-225ENST00000556798 PAQR3Q6TCH7 311 aa17■□□□□ 0.31
SHMT2-225ENST00000556798 UNC5DQ6UXZ4 953 aa17■□□□□ 0.31
SHMT2-225ENST00000556798 CCNI2Q6ZMN8 369 aaPredicted RBP17■□□□□ 0.31
SHMT2-225ENST00000556798 PIWIL4Q7Z3Z4 852 aaKnown RBP17■□□□□ 0.31
SHMT2-225ENST00000556798 RCBTB1Q8NDN9 531 aa17■□□□□ 0.31
SHMT2-225ENST00000556798 CCDC74BQ96LY2 380 aa17■□□□□ 0.31
SHMT2-225ENST00000556798 TGM7Q96PF1 710 aa17■□□□□ 0.31
SHMT2-225ENST00000556798 RBBP8Q99708 897 aa17■□□□□ 0.31
SHMT2-225ENST00000556798 EPB41L1Q9H4G0 881 aa17■□□□□ 0.31
SHMT2-225ENST00000556798 KLHL42Q9P2K6 505 aa17■□□□□ 0.31
SHMT2-225ENST00000556798 ICKQ9UPZ9 632 aa17■□□□□ 0.31
SHMT2-225ENST00000556798 MTO1Q9Y2Z2 717 aaKnown RBP17■□□□□ 0.31
SHMT2-225ENST00000556798 IGHV5-10-1A0A0J9YXX1 117 aa16.99■□□□□ 0.31
SHMT2-225ENST00000556798 OR6C74A6NCV1 312 aa16.99■□□□□ 0.31
SHMT2-225ENST00000556798 CAPN5O15484 640 aaPredicted RBP16.99■□□□□ 0.31
SHMT2-225ENST00000556798 TPBGLP0DKB5 382 aa16.99■□□□□ 0.31
SHMT2-225ENST00000556798 THRAP10827 490 aa16.99■□□□□ 0.31
SHMT2-225ENST00000556798 TNFRSF8P28908 595 aa16.99■□□□□ 0.31
SHMT2-225ENST00000556798 LIMK2P53671 638 aa16.99■□□□□ 0.31
SHMT2-225ENST00000556798 TAS2R39P59534 338 aa16.99■□□□□ 0.31
SHMT2-225ENST00000556798 SHC2P98077 582 aa16.99■□□□□ 0.31
SHMT2-225ENST00000556798 ZFP36L1Q07352 338 aaKnown RBP16.99■□□□□ 0.31
SHMT2-225ENST00000556798 NAB1Q13506 487 aa16.99■□□□□ 0.31
SHMT2-225ENST00000556798 CLPPQ16740 277 aaPredicted RBP16.99■□□□□ 0.31
SHMT2-225ENST00000556798 CCSMST1Q4G0I0 132 aa16.99■□□□□ 0.31
SHMT2-225ENST00000556798 IRGCQ6NXR0 463 aa16.99■□□□□ 0.31
SHMT2-225ENST00000556798 TMEM71Q6P5X7 295 aa16.99■□□□□ 0.31
SHMT2-225ENST00000556798 WDR74Q6RFH5 385 aaPredicted RBP16.99■□□□□ 0.31
SHMT2-225ENST00000556798 OOSP2Q86WS3 158 aa16.99■□□□□ 0.31
SHMT2-225ENST00000556798 DCUN1D3Q8IWE4 304 aa16.99■□□□□ 0.31
SHMT2-225ENST00000556798 CACTIN-AS1Q8N1I8 211 aa16.99■□□□□ 0.31
SHMT2-225ENST00000556798 OR4D9Q8NGE8 314 aa16.99■□□□□ 0.31
SHMT2-225ENST00000556798 FOPNLQ96NB1 174 aa16.99■□□□□ 0.31
SHMT2-225ENST00000556798 TMEM74Q96NL1 305 aa16.99■□□□□ 0.31
SHMT2-225ENST00000556798 SRMSQ9H3Y6 488 aa16.99■□□□□ 0.31
SHMT2-225ENST00000556798 TFB2MQ9H5Q4 396 aaKnown RBP16.99■□□□□ 0.31
SHMT2-225ENST00000556798 ACSS3Q9H6R3 686 aa16.99■□□□□ 0.31
SHMT2-225ENST00000556798 CAB39LQ9H9S4 337 aa16.99■□□□□ 0.31
SHMT2-225ENST00000556798 MSRB2Q9Y3D2 182 aa16.99■□□□□ 0.31
SHMT2-225ENST00000556798 PCM1Q15154 2024 aa16.99■□□□□ 0.31
SHMT2-225ENST00000556798 MN1Q10571 1320 aaPredicted RBP16.98■□□□□ 0.31
SHMT2-225ENST00000556798 PMS2P1A4D2B8 440 aa16.98■□□□□ 0.31
SHMT2-225ENST00000556798 FAM221BA6H8Z2 402 aa16.98■□□□□ 0.31
SHMT2-225ENST00000556798 OR5K3A6NET4 321 aa16.98■□□□□ 0.31
SHMT2-225ENST00000556798 A8MU76 341 aa16.98■□□□□ 0.31
SHMT2-225ENST00000556798 MATN4O95460 622 aa16.98■□□□□ 0.31
SHMT2-225ENST00000556798 C1orf105O95561 183 aa16.98■□□□□ 0.31
SHMT2-225ENST00000556798 RPN2P04844 631 aa16.98■□□□□ 0.31
SHMT2-225ENST00000556798 ENO3P13929 434 aaPredicted RBP16.98■□□□□ 0.31
SHMT2-225ENST00000556798 POLR2CP19387 275 aaPredicted RBP16.98■□□□□ 0.31
SHMT2-225ENST00000556798 CCKBRP32239 447 aa16.98■□□□□ 0.31
SHMT2-225ENST00000556798 SKIV2L2P42285 1042 aaKnown RBP16.98■□□□□ 0.31
SHMT2-225ENST00000556798 PMS2P54278 862 aa16.98■□□□□ 0.31
SHMT2-225ENST00000556798 VSNL1P62760 191 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms