RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 NRG4Q8WWG1 115 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 ELSPBP1Q96BH3 223 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 TRMT61BQ9BVS5 477 aaKnown RBP17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 S1PR5Q9H228 398 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 MRGBPQ9NV56 204 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 RIC8BQ9NVN3 520 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 CLDND1Q9NY35 253 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 PRPF19Q9UMS4 504 aaKnown RBP17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 PCDHGA7Q9Y5G6 932 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 GPR45Q9Y5Y3 372 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 STON1Q9Y6Q2 735 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 E7ENX8 843 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 ATG13O75143 517 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 WDR47O94967 919 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 MPC1LP0DKB6 136 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 IDO1P14902 403 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 CAPN3P20807 821 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 ITPKAP23677 461 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 PDHA2P29803 388 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 ACADVLP49748 655 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 RPS6KA3P51812 740 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 UFM1P61960 85 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 SLC34A1Q06495 639 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 NR6A1Q15406 480 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 ZNF423Q2M1K9 1284 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 ITPRIPL2Q3MIP1 535 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 PIGGQ5H8A4 983 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 RETREG3Q86VR2 466 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 SPDYE1Q8NFV5 336 aaPredicted RBP17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 UBTD2Q8WUN7 234 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 SERPINI1Q99574 410 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 SDR39U1Q9NRG7 319 aaPredicted RBP17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 C1QTNF3-AMACRE9PGA6 284 aa17.89■□□□□ 0.46
SDR39U1-220ENST00000556548 GFYI3L273 518 aa17.89■□□□□ 0.46
SDR39U1-220ENST00000556548 KPNA5O15131 536 aa17.89■□□□□ 0.46
SDR39U1-220ENST00000556548 MID1O15344 667 aa17.89■□□□□ 0.46
SDR39U1-220ENST00000556548 APODP05090 189 aa17.89■□□□□ 0.46
SDR39U1-220ENST00000556548 EPORP19235 508 aa17.89■□□□□ 0.46
SDR39U1-220ENST00000556548 TIE1P35590 1138 aa17.89■□□□□ 0.46
SDR39U1-220ENST00000556548 PTCHD3Q3KNS1 767 aa17.89■□□□□ 0.46
SDR39U1-220ENST00000556548 SPATA19Q7Z5L4 167 aa17.89■□□□□ 0.46
SDR39U1-220ENST00000556548 DSG4Q86SJ6 1040 aa17.89■□□□□ 0.46
SDR39U1-220ENST00000556548 CXorf40AQ8TE69 158 aa17.89■□□□□ 0.46
SDR39U1-220ENST00000556548 NUDT8Q8WV74 236 aa17.89■□□□□ 0.46
SDR39U1-220ENST00000556548 TMEM159Q96B96 161 aa17.89■□□□□ 0.46
SDR39U1-220ENST00000556548 CCM2Q9BSQ5 444 aa17.89■□□□□ 0.46
SDR39U1-220ENST00000556548 STX18Q9P2W9 335 aaKnown RBP17.89■□□□□ 0.46
SDR39U1-220ENST00000556548 C15orf41Q9Y2V0 281 aa17.89■□□□□ 0.46
SDR39U1-220ENST00000556548 ENO4A6NNW6 628 aa17.89■□□□□ 0.45
SDR39U1-220ENST00000556548 EIF3FO00303 357 aaPredicted RBP17.89■□□□□ 0.45
SDR39U1-220ENST00000556548 SLCO2B1O94956 709 aa17.89■□□□□ 0.45
SDR39U1-220ENST00000556548 CYP2A7P20853 494 aa17.89■□□□□ 0.45
SDR39U1-220ENST00000556548 PRLHRP49683 370 aa17.89■□□□□ 0.45
SDR39U1-220ENST00000556548 GALK1P51570 392 aa17.89■□□□□ 0.45
SDR39U1-220ENST00000556548 HMGCS1Q01581 520 aa17.89■□□□□ 0.45
SDR39U1-220ENST00000556548 CDC16Q13042 620 aa17.89■□□□□ 0.45
SDR39U1-220ENST00000556548 CPSF6Q16630 551 aaKnown RBP eCLIP17.89■□□□□ 0.45
SDR39U1-220ENST00000556548 GSTA3Q16772 222 aa17.89■□□□□ 0.45
SDR39U1-220ENST00000556548 CCSMST1Q4G0I0 132 aa17.89■□□□□ 0.45
SDR39U1-220ENST00000556548 TRAPPC5Q8IUR0 188 aa17.89■□□□□ 0.45
SDR39U1-220ENST00000556548 PLA2G15Q8NCC3 412 aa17.89■□□□□ 0.45
SDR39U1-220ENST00000556548 MCOLN3Q8TDD5 553 aa17.89■□□□□ 0.45
SDR39U1-220ENST00000556548 VPS33AQ96AX1 596 aa17.89■□□□□ 0.45
SDR39U1-220ENST00000556548 SLC32A1Q9H598 525 aa17.89■□□□□ 0.45
SDR39U1-220ENST00000556548 PFDN4Q9NQP4 134 aa17.89■□□□□ 0.45
SDR39U1-220ENST00000556548 AIG1Q9NVV5 245 aa17.89■□□□□ 0.45
SDR39U1-220ENST00000556548 NDE1Q9NXR1 346 aa17.89■□□□□ 0.45
SDR39U1-220ENST00000556548 SLC22A14Q9Y267 594 aa17.89■□□□□ 0.45
SDR39U1-220ENST00000556548 ANPEPP15144 967 aa17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 ERVK-8P63133 956 aa17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 MS4A2Q01362 244 aa17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 OGFOD2Q6N063 350 aa17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 ZNF513Q8N8E2 541 aaPredicted RBP17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 ACTR8Q9H981 624 aa17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 STOML1Q9UBI4 398 aa17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 PRKAB1Q9Y478 270 aa17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 ARHGEF33A8MVX0 844 aa17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 SMNDC1O75940 238 aaKnown RBP eCLIP17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 BDKRB1P46663 353 aa17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 AP2B1P63010 937 aa17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 AAK1Q2M2I8 961 aa17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 AP5B1Q2VPB7 878 aa17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 PLA2G4EQ3MJ16 856 aa17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 RFTN2Q52LD8 501 aaPredicted RBP17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 NEK5Q6P3R8 708 aa17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 CYP2U1Q7Z449 544 aa17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 ADGRG6Q86SQ4 1221 aa17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 CFAP206Q8IYR0 622 aa17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 AADATQ8N5Z0 425 aa17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 S100A14Q9HCY8 104 aa17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 ZNF490Q9ULM2 529 aaPredicted RBP17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 TMEM98Q9Y2Y6 226 aa17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 FADS3Q9Y5Q0 445 aa17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 ATG2BQ96BY7 2078 aa17.88■□□□□ 0.45
SDR39U1-220ENST00000556548 KIAA1549LQ6ZVL6 1849 aa17.87■□□□□ 0.45
SDR39U1-220ENST00000556548 LSM1O15116 133 aaKnown RBP17.87■□□□□ 0.45
SDR39U1-220ENST00000556548 ENO2P09104 434 aaPredicted RBP17.87■□□□□ 0.45
SDR39U1-220ENST00000556548 DRD3P35462 400 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms