RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 MPOP05164 745 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 HMBSP08397 361 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ATXN1LP0C7T5 689 aaKnown RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 SLC2A3P11169 496 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 UMPSP11172 480 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 RALBP11234 206 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 PRKCAP17252 672 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 TNNI3P19429 210 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ACVRL1P37023 503 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 TAGLN2P37802 199 aaKnown RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 KCNQ1P51787 676 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 CAPZA1P52907 286 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ARHGAP8P85298 464 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 RING1Q06587 406 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 PUDPQ08623 228 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 UBAP2LQ14157 1087 aaKnown RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 C10orf120Q5SQS8 335 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 KIAA0930Q6ICG6 404 aaPredicted RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ANKS3Q6ZW76 656 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 GALNT12Q8IXK2 581 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ABI1Q8IZP0 508 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ZNF781Q8N8C0 355 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 GLB1L3Q8NCI6 653 aaPredicted RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 C2CD4AQ8NCU7 369 aaPredicted RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 MAPK15Q8TD08 544 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 RMND5BQ96G75 393 aaPredicted RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 UCN2Q96RP3 112 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 TMEM79Q9BSE2 394 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 TTLL2Q9BWV7 592 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 FSD1LQ9BXM9 530 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 TINAGL1Q9GZM7 467 aaPredicted RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 WWP1Q9H0M0 922 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ZNF700Q9H0M5 742 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 NMRAL1Q9HBL8 299 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 MCCC2Q9HCC0 563 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ACSS2Q9NR19 701 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 TLR8Q9NR97 1041 aaKnown RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 DNAJC11Q9NVH1 559 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 NKIRAS2Q9NYR9 191 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 PTTG2Q9NZH5 202 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ACTR3BQ9P1U1 418 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 TNFRSF10DQ9UBN6 386 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 SLC39A10Q9ULF5 831 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ACTL7AQ9Y615 435 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 CDY1Q9Y6F8 540 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 A0A1W2PQ72 361 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 LRRC14BA6NHZ5 514 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 C2orf74A8MZ97 194 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 TLR5O60602 858 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 CCDC22O60826 627 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ENTPD5O75356 428 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 WFS1O76024 890 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 RAB3DO95716 219 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ADH1CP00326 375 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 SERPINA6P08185 405 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 CCR10P46092 362 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 CPA2P48052 419 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 GNG10P50151 68 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ABCE1P61221 599 aaKnown RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ERVK-21P61565 698 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 CAMK2DQ13557 499 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ADRM1Q16186 407 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 LEXMQ3ZCV2 418 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 C5orf22Q49AR2 442 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 TSTD2Q5T7W7 516 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 SLC8B1Q6J4K2 584 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 RETSATQ6NUM9 610 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 TMC8Q8IU68 726 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 SLC41A1Q8IVJ1 513 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 LEMD2Q8NC56 503 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 SHKBP1Q8TBC3 707 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ADAMTS16Q8TE57 1224 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 SH3RF2Q8TEC5 729 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 NAT14Q8WUY8 206 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 PABPC5Q96DU9 382 aaKnown RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 CRELD1Q96HD1 420 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 NSL1Q96IY1 281 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 MAP6Q96JE9 813 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 RAB3IPQ96QF0 476 aaPredicted RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 UHRF1Q96T88 793 aaPredicted RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 CTRCQ99895 268 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 UNC93B1Q9H1C4 597 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 FBRSQ9HAH7 460 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 TREM1Q9NP99 234 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 NT5MQ9NPB1 228 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 PAK6Q9NQU5 681 aaPredicted RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 DIABLOQ9NR28 239 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 OXSMQ9NWU1 459 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 PLA2G4CQ9UP65 541 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 SPTBN5Q9NRC6 3674 aaKnown RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 A0A0D9SEW6 157 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 MROH6A6NGR9 719 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 ZNF98A6NK75 572 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 H3BNC9 293 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 MBP02144 154 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 CXCL10P02778 98 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 CHRNGP07510 517 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 ICAM2P13598 275 aa5□□□□□ -1.61
TMEM260-210ENST00000556422 CD1EP15812 388 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms