RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 ZRANB2O95218 330 aaKnown RBP eCLIP13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 GCGRP47871 477 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 GEMP55040 296 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 TMPRSS15P98073 1019 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 TRIM14Q14142 442 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 GSE1Q14687 1217 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 ANKRD20A2Q5SQ80 823 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 ANKRD20A1Q5TYW2 823 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 ANKRD20A3Q5VUR7 823 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 SNX20Q7Z614 316 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 MRGPREQ86SM8 312 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 TRIM73Q86UV7 250 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 HPS6Q86YV9 775 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 RCOR2Q8IZ40 523 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 CLDN19Q8N6F1 224 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 ACTL9Q8TC94 416 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 GBP5Q96PP8 586 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 FERD3LQ96RJ6 166 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 C19orf43Q9BQ61 176 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 ZNF552Q9H707 407 aaPredicted RBP13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 CASS4Q9NQ75 786 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 ASF1BQ9NVP2 202 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 SPHK1Q9NYA1 384 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 NTNG1Q9Y2I2 539 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 HEBP2Q9Y5Z4 205 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 TEP1Q99973 2627 aaKnown RBP13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 APCP25054 2843 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 H7C0S8 307 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 ANXA9O76027 345 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 ITGAXP20702 1163 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 CYP2A7P20853 494 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 ACADLP28330 430 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 PEBP1P30086 187 aaKnown RBP13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 CD151P48509 253 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 OTUD4Q01804 1114 aaKnown RBP13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 PRKAA1Q13131 559 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 PRKG2Q13237 762 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 SPARCL1Q14515 664 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 DEFB110Q30KQ9 67 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 KCTD11Q693B1 232 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 SPESP1Q6UW49 350 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 IGFL3Q6UXB1 125 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 AMIGO1Q86WK6 493 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 CCDC110Q8TBZ0 833 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 DNAJC1Q96KC8 554 aaKnown RBP13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 OR2A14Q96R47 310 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 COPS8Q99627 209 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 FAM118BQ9BPY3 351 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 SPRTNQ9H040 489 aaPredicted RBP13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 FANCEQ9HB96 536 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 SLAMF7Q9NQ25 335 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 SLC22A11Q9NSA0 550 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 ZNHIT6Q9NWK9 470 aaKnown RBP13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 ZDHHC3Q9NYG2 299 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 ACTR10Q9NZ32 417 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 CRLS1Q9UJA2 301 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 PRSS21Q9Y6M0 314 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 ZGRF1Q86YA3 2104 aa13.88□□□□□ -0.19
CHMP4BP1-201ENST00000556017 E7EQ34 232 aa13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 DDAH2O95865 285 aa13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 UMODP07911 640 aa13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 PSMA3P25788 255 aa13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 ACRV1P26436 265 aa13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 MC4RP32245 332 aa13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 NR6A1Q15406 480 aa13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 ODF2Q5BJF6 829 aa13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 VWA5B1Q5TIE3 1220 aa13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 RHBDD2Q6NTF9 364 aa13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 AADACL2Q6P093 401 aa13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 MRPL14Q6P1L8 145 aaKnown RBP13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 PPP1R32Q7Z5V6 425 aa13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 SERPINA9Q86WD7 417 aa13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 CISD2Q8N5K1 135 aaKnown RBP13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 OR5AR1Q8NGP9 310 aa13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 PRR7Q8TB68 274 aa13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 TFGQ92734 400 aaPredicted RBP13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 ULK4Q96C45 1275 aa13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 RBM41Q96IZ5 413 aaKnown RBP13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 DPH2Q9BQC3 489 aaPredicted RBP13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 HGH1Q9BTY7 390 aa13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 CHRNA10Q9GZZ6 450 aa13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 MVB12BQ9H7P6 319 aa13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 C5AR2Q9P296 337 aa13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 SERTAD3Q9UJW9 196 aa13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 SVILO95425 2214 aa13.87□□□□□ -0.19
CHMP4BP1-201ENST00000556017 RCCD1A6NED2 376 aa13.86□□□□□ -0.19
CHMP4BP1-201ENST00000556017 BHMG1C9JSJ3 638 aaPredicted RBP13.86□□□□□ -0.19
CHMP4BP1-201ENST00000556017 H7C0C1 242 aa13.86□□□□□ -0.19
CHMP4BP1-201ENST00000556017 PJA2O43164 708 aa13.86□□□□□ -0.19
CHMP4BP1-201ENST00000556017 UGT2B7P16662 529 aa13.86□□□□□ -0.19
CHMP4BP1-201ENST00000556017 OTX2P32243 289 aa13.86□□□□□ -0.19
CHMP4BP1-201ENST00000556017 DCTP40126 519 aa13.86□□□□□ -0.19
CHMP4BP1-201ENST00000556017 HADHAP40939 763 aa13.86□□□□□ -0.19
CHMP4BP1-201ENST00000556017 TNNT3P45378 269 aaPredicted RBP13.86□□□□□ -0.19
CHMP4BP1-201ENST00000556017 ATP5OP48047 213 aa13.86□□□□□ -0.19
CHMP4BP1-201ENST00000556017 RRADP55042 308 aa13.86□□□□□ -0.19
CHMP4BP1-201ENST00000556017 SOX8P57073 446 aa13.86□□□□□ -0.19
CHMP4BP1-201ENST00000556017 RPA4Q13156 261 aa13.86□□□□□ -0.19
CHMP4BP1-201ENST00000556017 KRT33BQ14525 404 aa13.86□□□□□ -0.19
CHMP4BP1-201ENST00000556017 SSPNQ14714 243 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms