RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 FBXO39Q8N4B4 442 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 SPATA6LQ8N4H0 392 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 FAM46DQ8NEK8 389 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 ARMC2Q8NEN0 867 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 MAPK15Q8TD08 544 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 ANKRD49Q8WVL7 239 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 ATOH1Q92858 354 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-220ENST00000555634 RAD51AP1Q96B01 352 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 SLC30A3Q99726 388 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 DUSP23Q9BVJ7 150 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 ZMYND15Q9H091 742 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 TM7SF3Q9NS93 570 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 POT1Q9NUX5 634 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 WWOXQ9NZC7 414 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 TAAR2Q9P1P5 351 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 GALPQ9UBC7 116 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 LNPEPQ9UIQ6 1025 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 STK38LQ9Y2H1 464 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 ANGPTL3Q9Y5C1 460 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 TNPO3Q9Y5L0 923 aaKnown RBP10.94□□□□□ -0.66
SHMT2-220ENST00000555634 SNX11Q9Y5W9 270 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 CDC7O00311 574 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 BIRC5O15392 142 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 PSIP1O75475 530 aaKnown RBP10.93□□□□□ -0.66
SHMT2-220ENST00000555634 PIAS2O75928 621 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 SNUPNO95149 360 aaKnown RBP10.93□□□□□ -0.66
SHMT2-220ENST00000555634 WISP3O95389 354 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-220ENST00000555634 MATN4O95460 622 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 TSPAN12O95859 305 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 VIPP01282 170 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 PROCP04070 461 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 RETP07949 1114 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 CHN1P15882 459 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 CCND1P24385 295 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 ATP5F1P24539 256 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-220ENST00000555634 RPIAP49247 311 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 ATP1A2P50993 1020 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 ALDH18A1P54886 795 aaKnown RBP10.93□□□□□ -0.66
SHMT2-220ENST00000555634 TIAL1Q01085 375 aaKnown RBP eCLIP10.93□□□□□ -0.66
SHMT2-220ENST00000555634 ABRQ12979 859 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 KIF19Q2TAC6 998 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 TPRG1LQ5T0D9 272 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 LIPMQ5VYY2 423 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 ATG16L1Q676U5 607 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 SULT1C3Q6IMI6 304 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 ZYG11AQ6WRX3 759 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 FAM83HQ6ZRV2 1179 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-220ENST00000555634 SPATS2Q86XZ4 545 aaKnown RBP10.93□□□□□ -0.66
SHMT2-220ENST00000555634 NUDCD3Q8IVD9 361 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 KIRREL3Q8IZU9 778 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 PLD6Q8N2A8 252 aaKnown RBP10.93□□□□□ -0.66
SHMT2-220ENST00000555634 OR5K2Q8NHB8 316 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 RAB3IL1Q8TBN0 382 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 LRRC8CQ8TDW0 803 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 PPP4R1Q8TF05 950 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 ZDHHC1Q8WTX9 485 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 ASB11Q8WXH4 323 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 SH3KBP1Q96B97 665 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 RMDN2Q96LZ7 410 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 CCDC138Q96M89 665 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 FERD3LQ96RJ6 166 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 HGH1Q9BTY7 390 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 GTPBP2Q9BX10 602 aaKnown RBP10.93□□□□□ -0.66
SHMT2-220ENST00000555634 SLC12A9Q9BXP2 914 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 UNKQ9C0B0 810 aaKnown RBP10.93□□□□□ -0.66
SHMT2-220ENST00000555634 OR52A5Q9H2C5 316 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 ARRDC1-AS1Q9H2J1 176 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 RDH14Q9HBH5 336 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 UTP6Q9NYH9 597 aaKnown RBP10.93□□□□□ -0.66
SHMT2-220ENST00000555634 TMEM216Q9P0N5 145 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 SPATA7Q9P0W8 599 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 COPG2Q9UBF2 871 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 SLC23A2Q9UGH3 650 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 PCOLCE2Q9UKZ9 415 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 CDYLQ9Y232 598 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 TDRKHQ9Y2W6 561 aaKnown RBP10.93□□□□□ -0.66
SHMT2-220ENST00000555634 SLCO1B1Q9Y6L6 691 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 CSNK1G3Q9Y6M4 447 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 PIEZO1Q92508 2521 aa10.93□□□□□ -0.66
SHMT2-220ENST00000555634 ARHGEF17Q96PE2 2063 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-220ENST00000555634 NCF1BA6NI72 391 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-220ENST00000555634 NCF1CA8MVU1 366 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-220ENST00000555634 LMO7DNF2Z398 122 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 ARHGAP33O14559 1287 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 FFAR2O15552 330 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 GUCA1CO95843 209 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 NCF1P14598 390 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-220ENST00000555634 AK4P27144 223 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-220ENST00000555634 EPHA8P29322 1005 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-220ENST00000555634 PDHA2P29803 388 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 ALDH3A1P30838 453 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 SHMT2P34897 504 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 ARL1P40616 181 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-220ENST00000555634 BDKRB1P46663 353 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 SERPINB4P48594 390 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 PGGT1BP53609 377 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 NFKB2Q00653 900 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 SUZ12Q15022 739 aaKnown RBP10.92□□□□□ -0.66
SHMT2-220ENST00000555634 TGFBIQ15582 683 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 OR4D1Q15615 310 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms