RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 ZRANB3Q5FWF4 1079 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 CYB5D1Q6P9G0 228 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 ZNF517Q6ZMY9 492 aaPredicted RBP10.51□□□□□ -0.73
TDP1-212ENST00000555565 PEX26Q7Z412 305 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 OOSP2Q86WS3 158 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 KMT5CQ86Y97 462 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 D2HGDHQ8N465 521 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 FAM71DQ8N9W8 422 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 HM13Q8TCT9 377 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 ULK4Q96C45 1275 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 PPM1MQ96MI6 270 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 FCRL4Q96PJ5 515 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 BAG1Q99933 345 aaPredicted RBP10.51□□□□□ -0.73
TDP1-212ENST00000555565 UNKQ9C0B0 810 aaKnown RBP10.51□□□□□ -0.73
TDP1-212ENST00000555565 SLAMF7Q9NQ25 335 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 ACSS2Q9NR19 701 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 FEZ2Q9UHY8 353 aaPredicted RBP10.51□□□□□ -0.73
TDP1-212ENST00000555565 AMFRQ9UKV5 643 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 RARRES3Q9UL19 164 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 ENTPD4Q9Y227 616 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 R3HDM2Q9Y2K5 976 aaKnown RBP10.51□□□□□ -0.73
TDP1-212ENST00000555565 ZNF451Q9Y4E5 1061 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 CROCCQ5TZA2 2017 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 C17orf113A0A1B0GUU1 675 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 TCRBV7S2A1N4TA0A589 114 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 MIF4GDA9UHW6 222 aaKnown RBP10.5□□□□□ -0.73
TDP1-212ENST00000555565 CFAP99D6REC4 459 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 H7C0S8 307 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 DPM1O60762 260 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 ZNF189O75820 626 aaPredicted RBP10.5□□□□□ -0.73
TDP1-212ENST00000555565 ZBTB11O95625 1053 aaPredicted RBP10.5□□□□□ -0.73
TDP1-212ENST00000555565 FTCDO95954 541 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 MT-ND3P03897 115 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 TPH1P17752 444 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 MC4RP32245 332 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 PTGIRP43119 386 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 ARL4DP49703 201 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 GDF10P55107 478 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 HSD11B2P80365 405 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 GPR33Q49SQ1 333 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 FBXO38Q6PIJ6 1188 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 ARHGEF18Q6ZSZ5 1173 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 KIAA1328Q86T90 577 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 SYVN1Q86TM6 617 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 BPHLQ86WA6 291 aaPredicted RBP10.5□□□□□ -0.73
TDP1-212ENST00000555565 SERPINA9Q86WD7 417 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 GAS2L3Q86XJ1 694 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 PIANPQ8IYJ0 282 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 CLDN19Q8N6F1 224 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 UBL4BQ8N7F7 174 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 OR4E2Q8NGC2 313 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 SLC35B2Q8TB61 432 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 HEXDCQ8WVB3 486 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 SEC14L1Q92503 715 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 ZNF501Q96CX3 271 aaPredicted RBP10.5□□□□□ -0.73
TDP1-212ENST00000555565 SMAD5Q99717 465 aaKnown RBP10.5□□□□□ -0.73
TDP1-212ENST00000555565 CCM2Q9BSQ5 444 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 TMEM121Q9BTD3 319 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 NLE1Q9NVX2 485 aaPredicted RBP10.5□□□□□ -0.73
TDP1-212ENST00000555565 PIH1D1Q9NWS0 290 aaKnown RBP10.5□□□□□ -0.73
TDP1-212ENST00000555565 ZDHHC3Q9NYG2 299 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 COLEC10Q9Y6Z7 277 aa10.5□□□□□ -0.73
TDP1-212ENST00000555565 PCSK5Q92824 1860 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 ARHGAP10A1A4S6 786 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 GOLGA6L9A6NEM1 432 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 ANKUB1A6NFN9 424 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 AP2A1O95782 977 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 PTMAP06454 111 aaKnown RBP10.49□□□□□ -0.73
TDP1-212ENST00000555565 POLR2CP19387 275 aaPredicted RBP10.49□□□□□ -0.73
TDP1-212ENST00000555565 ACRV1P26436 265 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 NDUFS1P28331 727 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 PDHA2P29803 388 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 ITGA1P56199 1179 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 TUBB4BP68371 445 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 KIF5AQ12840 1032 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 TUBB2AQ13885 445 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 KRT33BQ14525 404 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 POU6F1Q14863 301 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 GPR19Q15760 415 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 SP5Q6BEB4 398 aaPredicted RBP10.49□□□□□ -0.73
TDP1-212ENST00000555565 ARMC6Q6NXE6 501 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 HPS6Q86YV9 775 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 SYCE1Q8N0S2 351 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 CARFQ8N187 725 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 TAB3Q8N5C8 712 aaPredicted RBP10.49□□□□□ -0.73
TDP1-212ENST00000555565 CISD2Q8N5K1 135 aaKnown RBP10.49□□□□□ -0.73
TDP1-212ENST00000555565 ACVR1CQ8NER5 493 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 LRRC45Q96CN5 670 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 MOCOSQ96EN8 888 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 CDKN2AIPNLQ96HQ2 116 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 NRTNQ99748 197 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 DESI2Q9BSY9 194 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 TUBB2BQ9BVA1 445 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 OR52A5Q9H2C5 316 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 LRRC40Q9H9A6 602 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 COG4Q9H9E3 785 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 POMT2Q9UKY4 750 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 BTRCQ9Y297 605 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 HEBP2Q9Y5Z4 205 aa10.49□□□□□ -0.73
TDP1-212ENST00000555565 SNRNP200O75643 2136 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms