RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 PATE1Q8WXA2 126 aa10.34□□□□□ -0.75
TMEM260-206ENST00000555046 NCSTNQ92542 709 aa10.34□□□□□ -0.75
TMEM260-206ENST00000555046 INPP5DQ92835 1189 aa10.34□□□□□ -0.75
TMEM260-206ENST00000555046 PWWP2AQ96N64 755 aa10.34□□□□□ -0.75
TMEM260-206ENST00000555046 BIRC8Q96P09 236 aa10.34□□□□□ -0.75
TMEM260-206ENST00000555046 CMKLR1Q99788 373 aa10.34□□□□□ -0.75
TMEM260-206ENST00000555046 NRSN2Q9GZP1 204 aa10.34□□□□□ -0.75
TMEM260-206ENST00000555046 ZMYND15Q9H091 742 aa10.34□□□□□ -0.75
TMEM260-206ENST00000555046 OR52A5Q9H2C5 316 aa10.34□□□□□ -0.75
TMEM260-206ENST00000555046 TRIT1Q9H3H1 467 aaKnown RBP10.34□□□□□ -0.75
TMEM260-206ENST00000555046 KIR3DX1Q9H7L2 352 aa10.34□□□□□ -0.75
TMEM260-206ENST00000555046 TAS2R13Q9NYV9 303 aa10.34□□□□□ -0.75
TMEM260-206ENST00000555046 FAM8A1Q9UBU6 413 aa10.34□□□□□ -0.75
TMEM260-206ENST00000555046 ASF1AQ9Y294 204 aa10.34□□□□□ -0.75
TMEM260-206ENST00000555046 A0A1W2PQM1 296 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 EIF3FO00303 357 aaPredicted RBP10.33□□□□□ -0.76
TMEM260-206ENST00000555046 MAP3K7O43318 606 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 CSO75390 466 aaKnown RBP10.33□□□□□ -0.76
TMEM260-206ENST00000555046 HAUS5O94927 633 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 AHSGP02765 367 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 ENO3P13929 434 aaPredicted RBP10.33□□□□□ -0.76
TMEM260-206ENST00000555046 ITGB6P18564 788 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 CD9P21926 228 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 ACADLP28330 430 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 PDHA2P29803 388 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 CCKBRP32239 447 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 SLC1A2P43004 574 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 RGS4P49798 205 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 ZFP36L1Q07352 338 aaKnown RBP10.33□□□□□ -0.76
TMEM260-206ENST00000555046 PRKAA1Q13131 559 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 GPR18Q14330 331 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 BRD3Q15059 726 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 PLCL1Q15111 1095 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 ZNF658BQ4V348 819 aaPredicted RBP10.33□□□□□ -0.76
TMEM260-206ENST00000555046 UNC5DQ6UXZ4 953 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 DENND6AQ8IWF6 608 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 SLC22A15Q8IZD6 547 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 NOA1Q8NC60 698 aaKnown RBP10.33□□□□□ -0.76
TMEM260-206ENST00000555046 LCN9Q8WX39 176 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.33□□□□□ -0.76
TMEM260-206ENST00000555046 VPS39Q96JC1 886 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 FMO2Q99518 471 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 TRIM56Q9BRZ2 755 aaKnown RBP10.33□□□□□ -0.76
TMEM260-206ENST00000555046 RAB33BQ9H082 229 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 SRMSQ9H3Y6 488 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 TFB2MQ9H5Q4 396 aaKnown RBP10.33□□□□□ -0.76
TMEM260-206ENST00000555046 FBXO6Q9NRD1 293 aaPredicted RBP10.33□□□□□ -0.76
TMEM260-206ENST00000555046 EPHA6Q9UF33 1036 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 DMGDHQ9UI17 866 aaKnown RBP10.33□□□□□ -0.76
TMEM260-206ENST00000555046 RABGEF1Q9UJ41 708 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 VWA7Q9Y334 891 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 DHRS7Q9Y394 339 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 ENTPD2Q9Y5L3 495 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 LRRK1Q38SD2 2015 aa10.33□□□□□ -0.76
TMEM260-206ENST00000555046 COL5A1P20908 1838 aaPredicted RBP10.33□□□□□ -0.76
TMEM260-206ENST00000555046 ESYT3A0FGR9 886 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 IQCF5A8MTL0 148 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 BHMG1C9JSJ3 638 aaPredicted RBP10.32□□□□□ -0.76
TMEM260-206ENST00000555046 D6RAR5 112 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 HGSO14964 777 aaPredicted RBP10.32□□□□□ -0.76
TMEM260-206ENST00000555046 BANF1O75531 89 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 CSTF2P33240 577 aaKnown RBP eCLIP10.32□□□□□ -0.76
TMEM260-206ENST00000555046 MLLT3P42568 568 aaPredicted RBP10.32□□□□□ -0.76
TMEM260-206ENST00000555046 PREPP48147 710 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 LIMK2P53671 638 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 ABRQ12979 859 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 NAB1Q13506 487 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 CTSL3PQ5NE16 218 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 CYB5D1Q6P9G0 228 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 CNSTQ6PJW8 725 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 ZDHHC24Q6UX98 284 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 NEK10Q6ZWH5 1172 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 OOSP2Q86WS3 158 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 SFTPA2Q8IWL1 248 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 CARFQ8N187 725 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 KRT222Q8N1A0 295 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 ZBTB2Q8N680 514 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 OR5K2Q8NHB8 316 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 WDR36Q8NI36 951 aaKnown RBP10.32□□□□□ -0.76
TMEM260-206ENST00000555046 NAT14Q8WUY8 206 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 RAD51AP1Q96B01 352 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 SLC22A18Q96BI1 424 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 CCDC97Q96F63 343 aaPredicted RBP10.32□□□□□ -0.76
TMEM260-206ENST00000555046 LIN37Q96GY3 246 aaPredicted RBP10.32□□□□□ -0.76
TMEM260-206ENST00000555046 RMDN2Q96LZ7 410 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 CPNE1Q99829 537 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 AARSD1Q9BTE6 412 aaKnown RBP10.32□□□□□ -0.76
TMEM260-206ENST00000555046 ZDHHC18Q9NUE0 388 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 IL1RAPL1Q9NZN1 696 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 OR6C2Q9NZP2 312 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 PDP2Q9P2J9 529 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 SLC24A2Q9UI40 661 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 LNPEPQ9UIQ6 1025 aa10.32□□□□□ -0.76
TMEM260-206ENST00000555046 TRMT6Q9UJA5 497 aaKnown RBP10.32□□□□□ -0.76
TMEM260-206ENST00000555046 TDRD6O60522 2096 aaKnown RBP10.32□□□□□ -0.76
TMEM260-206ENST00000555046 CCDC187A0A096LP49 1063 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 TRABD2BA6NFA1 517 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 MAP4P27816 1152 aaKnown RBP10.31□□□□□ -0.76
TMEM260-206ENST00000555046 RBMS1P29558 406 aaKnown RBP10.31□□□□□ -0.76
TMEM260-206ENST00000555046 SSTR1P30872 391 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms