RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 GRIK2Q13002 908 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 RBBP7Q16576 425 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 LRIT3Q3SXY7 679 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 TMEM259Q4ZIN3 620 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 PIGGQ5H8A4 983 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 EFL1Q7Z2Z2 1120 aaKnown RBP8.7□□□□□ -1.02
TDP1-210ENST00000554976 MYLK4Q86YV6 388 aaPredicted RBP8.7□□□□□ -1.02
TDP1-210ENST00000554976 TCAIMQ8N3R3 496 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 OXR1Q8N573 874 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 L3MBTL4Q8NA19 623 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 IL17RCQ8NAC3 791 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 ELMO1Q92556 727 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 ACTL8Q9H568 366 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 IPPKQ9H8X2 491 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 TRIM39Q9HCM9 518 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 HEBP1Q9NRV9 189 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 TMEM45AQ9NWC5 275 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 GPR34Q9UPC5 381 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 PCDHGA7Q9Y5G6 932 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 C17orf113A0A1B0GUU1 675 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 C2CD4DB7Z1M9 353 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 CFAP99D6REC4 459 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 ATG13O75143 517 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 ENTPD5O75356 428 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 WDR47O94967 919 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 GUCA1CO95843 209 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 OTCP00480 354 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 ZNF8P17098 575 aaPredicted RBP8.69□□□□□ -1.02
TDP1-210ENST00000554976 XPAP23025 273 aaPredicted RBP8.69□□□□□ -1.02
TDP1-210ENST00000554976 ACADLP28330 430 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 PDHA2P29803 388 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 AKT1P31749 480 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 CCNG1P51959 295 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 ACTR3P61158 418 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 KPNB1Q14974 876 aaKnown RBP8.69□□□□□ -1.02
TDP1-210ENST00000554976 ABRAXAS2Q15018 415 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 GSTA3Q16772 222 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 AAK1Q2M2I8 961 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 SMU1Q2TAY7 513 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 CCSMST1Q4G0I0 132 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 REP15Q6BDI9 236 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 PNCKQ6P2M8 343 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 SPATA19Q7Z5L4 167 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 DSELQ8IZU8 1212 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 PAF1Q8N7H5 531 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 RCN3Q96D15 328 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 DCUN1D1Q96GG9 259 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 FCRL1Q96LA6 429 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 TEX37Q96LM6 180 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 GPATCH1Q9BRR8 931 aaKnown RBP8.69□□□□□ -1.02
TDP1-210ENST00000554976 SLC32A1Q9H598 525 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 ASIC5Q9NY37 505 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 BLOC1S6Q9UL45 172 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 UNC80Q8N2C7 3258 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 LOC100653049A0A140TA62 436 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 INPP4BO15327 924 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 VEGFDO43915 354 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 KRT34O76011 436 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 CAPN1P07384 714 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 LBPP18428 481 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 TRIM23P36406 574 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 AP1S2P56377 157 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 HSPA14Q0VDF9 509 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 CUL3Q13618 768 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 KIAA0040Q15053 153 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 ZNF423Q2M1K9 1284 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 PDCD4Q53EL6 469 aaKnown RBP8.69□□□□□ -1.02
TDP1-210ENST00000554976 FAM46CQ5VWP2 391 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 NXNQ6DKJ4 435 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 TMEM220Q6QAJ8 160 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 PAOXQ6QHF9 649 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 RETREG3Q86VR2 466 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 PGAM4Q8N0Y7 254 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 ZNF687Q8N1G0 1237 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 OR9I1Q8NGQ6 314 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 OR2T3Q8NH03 318 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 ASZ1Q8WWH4 475 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 FOXJ1Q92949 421 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 LGR4Q9BXB1 951 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 MKRN2Q9H000 416 aaKnown RBP8.69□□□□□ -1.02
TDP1-210ENST00000554976 RNPEPL1Q9HAU8 725 aa8.69□□□□□ -1.02
TDP1-210ENST00000554976 PSMD12O00232 456 aaPredicted RBP8.68□□□□□ -1.02
TDP1-210ENST00000554976 ANXA5P08758 320 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 HGFP14210 728 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 CD22P20273 847 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 CCND1P24385 295 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 PREPP48147 710 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 CCNIQ14094 377 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 BOP1Q14137 746 aaKnown RBP8.68□□□□□ -1.02
TDP1-210ENST00000554976 FASTKQ14296 549 aaKnown RBP8.68□□□□□ -1.02
TDP1-210ENST00000554976 WSCD2Q2TBF2 565 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 C6orf136Q5SQH8 315 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 FAM83HQ6ZRV2 1179 aaPredicted RBP8.68□□□□□ -1.02
TDP1-210ENST00000554976 FBXW8Q8N3Y1 598 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 CDYL2Q8N8U2 506 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 OR2L2Q8NH16 312 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 HIC2Q96JB3 615 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 HHIPQ96QV1 700 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 THTPAQ9BU02 230 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 MENTQ9BUN1 341 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms