RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, human

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
XRCC3-208	ENST00000554811	RFXANK	O14593	260 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	SMAD6	O43541	496 aa	Known RBP	11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	BMP10	O95393	424 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	KLKB1	P03952	638 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	CYP11A1	P05108	521 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	ALDH3B2	P48448	385 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	CHRNA6	Q15825	494 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	SMN1	Q16637	294 aa	Known RBP	11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	CES5A	Q6NT32	575 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	RFLNA	Q6ZTI6	216 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	RNF180	Q86T96	592 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	OR7A2P	Q8NGA2	310 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	MCOLN3	Q8TDD5	553 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	SOCS4	Q8WXH5	440 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	HTRA1	Q92743	480 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	INPP5K	Q9BT40	448 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	E2F3	O00716	465 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	ANGPTL1	O95841	491 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	CDH1	P12830	882 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	NUDT6	P53370	316 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	FCGRT	P55899	365 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	ABR	Q12979	859 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	CBLB	Q13191	982 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	ZNF648	Q5T619	568 aa	Predicted RBP	11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	TXNDC11	Q6PKC3	985 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	VTCN1	Q7Z7D3	282 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	CENPS	Q8N2Z9	138 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	RHEBL1	Q8TAI7	183 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	MYO19	Q96H55	970 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	UROC1	Q96N76	676 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	BIRC8	Q96P09	236 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	PSKH2	Q96QS6	385 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	GPATCH1	Q9BRR8	931 aa	Known RBP	11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	RHNO1	Q9BSD3	238 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	MAGEH1	Q9H213	219 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	CNOT11	Q9UKZ1	510 aa	Known RBP	11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	SAMHD1	Q9Y3Z3	626 aa	Known RBP	11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	GNG14	A0A1W2PPG7	69 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811		H0Y858	1186 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	DLGAP1	O14490	977 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	BCKDK	O14874	412 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	RECQL5	O94762	991 aa	Predicted RBP	11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	FGF4	P08620	206 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	RPS17	P08708	135 aa	Known RBP	11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	DBT	P11182	482 aa	Known RBP	11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	TMED10	P49755	219 aa	Known RBP	11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	STK19	P49842	368 aa	Predicted RBP	11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	ZNF140	P52738	457 aa	Predicted RBP	11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	TUBA4A	P68366	448 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	DAB2	P98082	770 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	NFATC3	Q12968	1075 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	CBX3	Q13185	183 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	RGS21	Q2M5E4	152 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	INTS11	Q5TA45	600 aa	Known RBP	11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	GPR153	Q6NV75	609 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	PROSER1	Q86XN7	944 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	SYT12	Q8IV01	421 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	ZCCHC7	Q8N3Z6	543 aa	Known RBP	11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	BEND7	Q8N7W2	519 aa	Predicted RBP	11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	FBXO22	Q8NEZ5	403 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	BORCS5	Q969J3	196 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	NODAL	Q96S42	347 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	CARS2	Q9HA77	564 aa	Known RBP	11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	PAIP2B	Q9ULR5	123 aa	Known RBP	11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	GMPPB	Q9Y5P6	360 aa		11.63	□□□□□ -0.55
XRCC3-208	ENST00000554811	WDR90	Q96KV7	1748 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	PLXNA1	Q9UIW2	1896 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	ANKRD33B	A6NCL7	494 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	ZNF623	O75123	536 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	EED	O75530	441 aa	Known RBP	11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	TNFRSF1B	P20333	461 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	CTGF	P29279	349 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	HOXC13	P31276	330 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	MAPKAPK2	P49137	400 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	RPIA	P49247	311 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	EEFSEC	P57772	596 aa	Known RBP	11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	NFKB2	Q00653	900 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	CD47	Q08722	323 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	DMC1	Q14565	340 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	TTC23	Q5W5X9	447 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	ZFAND4	Q86XD8	727 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	PHYKPL	Q8IUZ5	450 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	P3H2	Q8IVL5	708 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	ZNF366	Q8N895	744 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	SMYD1	Q8NB12	490 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	UBE2F	Q969M7	185 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	REXO5	Q96IC2	774 aa	Known RBP	11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	PPP3R2	Q96LZ3	170 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	DACH2	Q96NX9	599 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	TTPAL	Q9BTX7	342 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	PDP1	Q9P0J1	537 aa	Predicted RBP	11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	CORIN	Q9Y5Q5	1042 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	SAP18	O00422	153 aa	Known RBP	11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	ACOX3	O15254	700 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	SEPT4	O43236	478 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	CLDN11	O75508	207 aa		11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	ENO2	P09104	434 aa	Predicted RBP	11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	XPA	P23025	273 aa	Predicted RBP	11.62	□□□□□ -0.55
XRCC3-208	ENST00000554811	IGFBP5	P24593	272 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms