RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 MGME1Q9BQP7 344 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 GPATCH1Q9BRR8 931 aaKnown RBP2.96□□□□□ -1.94
SCFD1-213ENST00000554776 KATNB1Q9BVA0 655 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 MOV10L1Q9BXT6 1211 aaKnown RBP2.96□□□□□ -1.94
SCFD1-213ENST00000554776 VPS33BQ9H267 617 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 EVA1AQ9H8M9 152 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 DONSONQ9NYP3 566 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 COQ3Q9NZJ6 369 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 DLGAP4Q9Y2H0 992 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 YIPF1Q9Y548 306 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 SPIN1Q9Y657 262 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-213ENST00000554776 ZCWPW2A0A1B0GU75 182 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 TMEM221A6NGB7 291 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 OR6C76A6NM76 312 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 FAM86B1E9PN63 330 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 BMPR1BO00238 502 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 CLIC2O15247 247 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 OR10H2O60403 315 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 SLU7O95391 586 aaKnown RBP2.95□□□□□ -1.94
SCFD1-213ENST00000554776 IGKV3-20P01619 116 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 FAM86B2P0C5J1 330 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 OR2T7P0C7T2 308 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 DANCRP0C864 163 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 FAM106CPP0CH98 169 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 SMIM18P0DKX4 95 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 DGKAP23743 735 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 CTNNA1P35221 906 aaKnown RBP2.95□□□□□ -1.94
SCFD1-213ENST00000554776 COPB2P35606 906 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 ARCN1P48444 511 aaKnown RBP2.95□□□□□ -1.94
SCFD1-213ENST00000554776 MMP15P51511 669 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 ZNF132P52740 706 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 CAPZA1P52907 286 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 MAPK12P53778 367 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 POLR2LP62875 67 aaKnown RBP2.95□□□□□ -1.94
SCFD1-213ENST00000554776 DMPKQ09013 629 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 BFSP1Q12934 665 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 GAGE2BQ13066 116 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 PTPRCAPQ14761 206 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 GAGE2EQ4V326 116 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 NDUFAF5Q5TEU4 345 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 PLA2G4FQ68DD2 849 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 GAGE2AQ6NT46 116 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 KLC3Q6P597 504 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 PET117Q6UWS5 81 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 PLXDC2Q6UX71 529 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 FOXL2NBQ6ZUU3 175 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 C9orf139Q6ZV77 190 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 DET1Q7L5Y6 550 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 SMIM29Q86T20 159 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 KMT5CQ86Y97 462 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 PTOV1Q86YD1 416 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.95□□□□□ -1.94
SCFD1-213ENST00000554776 CRYBG2Q8N1P7 616 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 ARHGAP24Q8N264 748 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 TTC30BQ8N4P2 665 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 POC1AQ8NBT0 407 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 KCNH5Q8NCM2 988 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 TMEM255BQ8WV15 326 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 SYN2Q92777 582 aaPredicted RBP2.95□□□□□ -1.94
SCFD1-213ENST00000554776 SLAMF9Q96A28 289 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 SPSB1Q96BD6 273 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 MTERF3Q96E29 417 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 LINGO1Q96FE5 620 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 CDCA5Q96FF9 252 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 VMP1Q96GC9 406 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 SFXN2Q96NB2 322 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 INTS14Q96SY0 518 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 SLC25A23Q9BV35 468 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 WNT5BQ9H1J7 359 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 FZD8Q9H461 694 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 PELI2Q9HAT8 420 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 PIH1D3Q9NQM4 214 aaKnown RBP2.95□□□□□ -1.94
SCFD1-213ENST00000554776 TXLNGQ9NUQ3 528 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 DPP3Q9NY33 737 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 GAGE2DQ9UEU5 116 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 KCNK7Q9Y2U2 307 aa2.95□□□□□ -1.94
SCFD1-213ENST00000554776 TCF20Q9UGU0 1960 aaKnown RBP2.94□□□□□ -1.94
SCFD1-213ENST00000554776 WDR81Q562E7 1941 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 TEX13DA0A0J9YY54 714 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-213ENST00000554776 ELOVL7A1L3X0 281 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 HYKKA2RU49 373 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 CTAGE9A4FU28 777 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 ASPDHA6ND91 283 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 H0Y626 953 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 H0YAE9 185 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 GPR137BO60478 399 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 IGLV2-11P01706 119 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 GBAP04062 536 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 TFAP2AP05549 437 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 UMODP07911 640 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 CTAGE8P0CG41 777 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 TCF4P15884 667 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 CKMT2P17540 419 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 AMD1P17707 334 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 GM2AP17900 193 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 CD22P20273 847 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 HOXC8P31273 242 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 HOXC13P31276 330 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 MTHFRP42898 656 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 BMXP51813 675 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms