RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 RCOR1Q9UKL0 485 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 TBX21Q9UL17 535 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 B3GNT3Q9Y2A9 372 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 PCDHA3Q9Y5H8 950 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 ROBO3Q96MS0 1386 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 USP24Q9UPU5 2620 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 CDK5RAP2Q96SN8 1893 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 MYO15AQ9UKN7 3530 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 GSTTP1A0A1W2PQM5 241 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 EPOPA6NHQ4 379 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 NCF1BA6NI72 391 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-227ENST00000554491 ZNF233A6NK53 670 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 NCF1CA8MVU1 366 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-227ENST00000554491 C2orf74A8MZ97 194 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 ZNF879B4DU55 563 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 H0YJX3 145 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 DDX39AO00148 427 aaKnown RBP4.36□□□□□ -1.71
ATXN3-227ENST00000554491 GRM8O00222 908 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 KPNA4O00629 521 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-227ENST00000554491 THAP12O43422 761 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 FRS3O43559 492 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 AP1G1O43747 822 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 MED24O75448 989 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 CBR3O75828 277 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 SEMA3DO95025 777 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 TIMP1P01033 207 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 KRT16P08779 473 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 IL9P15248 144 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 GNSP15586 552 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 NR1D1P20393 614 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 PON1P27169 355 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 SPAM1P38567 509 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 WNT5AP41221 380 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 SLC15A1P46059 708 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 RPL5P46777 297 aaKnown RBP4.36□□□□□ -1.71
ATXN3-227ENST00000554491 SLC6A9P48067 706 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 ALDH3A2P51648 485 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 ARHGDIAP52565 204 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 HMGCS2P54868 508 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 RPP30P78346 268 aaKnown RBP4.36□□□□□ -1.71
ATXN3-227ENST00000554491 IFITM2Q01629 132 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 DSC2Q02487 901 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 SRSF4Q08170 494 aaKnown RBP4.36□□□□□ -1.71
ATXN3-227ENST00000554491 TCP10Q12799 353 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 BAMBIQ13145 260 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 TARDBPQ13148 414 aaKnown RBP eCLIP4.36□□□□□ -1.71
ATXN3-227ENST00000554491 SNTA1Q13424 505 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 ZNF829Q3KNS6 432 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-227ENST00000554491 GALNTL6Q49A17 601 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 ANO6Q4KMQ2 910 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 PXDC1Q5TGL8 231 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 PTRHD1Q6GMV3 140 aaKnown RBP4.36□□□□□ -1.71
ATXN3-227ENST00000554491 ARMCX5Q6P1M9 558 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 BLOC1S2Q6QNY1 142 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 LDHAL6AQ6ZMR3 332 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 ZNF788Q6ZQV5 615 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 FAM47EQ6ZV65 393 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 DNAJB7Q7Z6W7 309 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-227ENST00000554491 RALGPS2Q86X27 583 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-227ENST00000554491 DENND6AQ8IWF6 608 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 CRYBG2Q8N1P7 616 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 FAM109AQ8N4B1 249 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 PPM1NQ8N819 430 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 ZNF321PQ8N8H1 164 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 PSD4Q8NDX1 1056 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 GPRC5AQ8NFJ5 357 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 CEP76Q8TAP6 659 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 POC1BQ8TC44 478 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 PIGOQ8TEQ8 1089 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 HEXDCQ8WVB3 486 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 UCMAQ8WVF2 138 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 POMGNT1Q8WZA1 660 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 HDAC2Q92769 488 aaKnown RBP4.36□□□□□ -1.71
ATXN3-227ENST00000554491 SYN2Q92777 582 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-227ENST00000554491 USP13Q92995 863 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-227ENST00000554491 GJA10Q969M2 543 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 KLHL29Q96CT2 875 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 LRRC39Q96DD0 335 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 ZNF486Q96H40 463 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-227ENST00000554491 AK8Q96MA6 479 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 CAMK1GQ96NX5 476 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 INPP4AQ96PE3 977 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-227ENST00000554491 TMEM237Q96Q45 408 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 PANX2Q96RD6 677 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 PKP4Q99569 1192 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 FERMT1Q9BQL6 677 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 SARGQ9BW04 601 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 ACE2Q9BYF1 805 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-227ENST00000554491 TRIM2Q9C040 744 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 HOXD1Q9GZZ0 328 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 MYLK2Q9H1R3 596 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 PORCNQ9H237 461 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 DCLRE1BQ9H816 532 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 ERVMER34-1Q9H9K5 563 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 PNPLA8Q9NP80 782 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 AGPAT3Q9NRZ7 376 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 C1orf112Q9NSG2 853 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 PARVAQ9NVD7 372 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 TRNAU1APQ9NX07 287 aaKnown RBP4.36□□□□□ -1.71
ATXN3-227ENST00000554491 CAPN11Q9UMQ6 739 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms