RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 CLHC1Q8NHS4 586 aa16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 RMDN1Q96DB5 314 aa16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 ATOH8Q96SQ7 321 aa16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 RHNO1Q9BSD3 238 aa16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 SPON2Q9BUD6 331 aa16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 C6orf62Q9GZU0 229 aaPredicted RBP16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 ZNF221Q9UK13 617 aa16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 PABPN1LA6NDY0 278 aaKnown RBP16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 AGAP5A6NIR3 686 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 RYKP34925 604 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 MLLT6P55198 1093 aaPredicted RBP16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 ZNF404Q494X3 552 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 MANEALQ5VSG8 457 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 FKBP9P1Q75LS8 142 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 SPATA19Q7Z5L4 167 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 RAB44Q7Z6P3 723 aaPredicted RBP16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 TMEM179BQ7Z7N9 219 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 KLHDC8BQ8IXV7 354 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 OR4K2Q8NGD2 314 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 ZNF566Q969W8 418 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 PRKD2Q9BZL6 878 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 DDX28Q9NUL7 540 aaKnown RBP16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 NOD1Q9Y239 953 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 PTCH2Q9Y6C5 1203 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 PLXNB2O15031 1838 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 ZNF236Q9UL36 1845 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 EFCAB9A8MZ26 197 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 BCKDKO14874 412 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 GGT1P19440 569 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 RGRP47804 291 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 CLK3P49761 638 aaKnown RBP16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 SETMARQ53H47 684 aaPredicted RBP16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 FBXL22Q6P050 247 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 RFPL4BQ6ZWI9 263 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 GDPD3Q7L5L3 318 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 B3GNT8Q7Z7M8 397 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 SYTL1Q8IYJ3 562 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 ARRDC2Q8TBH0 407 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 REXO5Q96IC2 774 aaKnown RBP16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 UGT2B28Q9BY64 529 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 DCSTAMPQ9H295 470 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 KAT8Q9H7Z6 458 aaKnown RBP16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 CSNK1G1Q9HCP0 422 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 CAB39Q9Y376 341 aaPredicted RBP16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 COMMD10Q9Y6G5 202 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 FNDC1Q4ZHG4 1894 aaPredicted RBP16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 FFAR3O14843 346 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 GPR42O15529 346 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 PRKD3O94806 890 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 GUCA1CO95843 209 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 IGLV3-25P01717 112 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 MT-ND2P03891 347 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 RENBPP51606 427 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 FOXD4Q12950 439 aaPredicted RBP16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 MS4A13Q5J8X5 152 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 AGAP6Q5VW22 663 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 PIANPQ8IYJ0 282 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 SVOPLQ8N434 492 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 IL17RDQ8NFM7 739 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 CHAC2Q8WUX2 184 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 AGAP4Q96P64 663 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 MED16Q9Y2X0 877 aa16.62■□□□□ 0.25
PPP4R3A-202ENST00000554390 CD36P16671 472 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 ALOX12P18054 663 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 SLC35A2P78381 396 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 MRPS15P82914 257 aaKnown RBP16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 CHRNEQ04844 493 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 TRAF3Q13114 568 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 PTPRNQ16849 979 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 LAIR1Q6GTX8 287 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 GATAD2AQ86YP4 633 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 OR7D4Q8NG98 312 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 OR6F1Q8NGZ6 308 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 BHMTQ93088 406 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 MMP27Q9H306 513 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 DUSP21Q9H596 190 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 ZBTB20Q9HC78 741 aaPredicted RBP16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 ABCC13Q9NSE7 274 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 SMPD4Q9NXE4 827 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 LIMD1Q9UGP4 676 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 VPS4BO75351 444 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 ALX3O95076 343 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 WISP3O95389 354 aaPredicted RBP16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 CYP11A1P05108 521 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 ODC1P11926 461 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 FDXRP22570 491 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 OR1E1P30953 314 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 PTGR1Q14914 329 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 GTDC1Q4AE62 458 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 ATAD3CQ5T2N8 411 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 CES5AQ6NT32 575 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 DLEU7Q6UYE1 221 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 ZNF598Q86UK7 904 aaKnown RBP16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 EEF1AKMT1Q8WVE0 214 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 TPRKBQ9Y3C4 175 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 BOLA1Q9Y3E2 137 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 GPSM3Q9Y4H4 160 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 PCDHB14Q9Y5E9 798 aa16.61■□□□□ 0.25
PPP4R3A-202ENST00000554390 MOXD2PA6NHM9 499 aa16.6■□□□□ 0.25
PPP4R3A-202ENST00000554390 C1QCP02747 245 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms