RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 GATA5Q9BWX5 397 aaPredicted RBP7.47□□□□□ -1.21
TDP1-209ENST00000554180 PITPNM3Q9BZ71 974 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 EML4Q9HC35 981 aaKnown RBP7.47□□□□□ -1.21
TDP1-209ENST00000554180 TM9SF3Q9HD45 589 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 SLCO1B3Q9NPD5 702 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 MRPL40Q9NQ50 206 aaKnown RBP7.47□□□□□ -1.21
TDP1-209ENST00000554180 TM7SF3Q9NS93 570 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 KLC4Q9NSK0 619 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 FGFR1OP2Q9NVK5 253 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 ARL15Q9NXU5 204 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 FAM8A1Q9UBU6 413 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 SUSD2Q9UGT4 822 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 MOSPD1Q9UJG1 213 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 HAO1Q9UJM8 370 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 PTBP2Q9UKA9 531 aaKnown RBP7.47□□□□□ -1.21
TDP1-209ENST00000554180 DNAJC16Q9Y2G8 782 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 STK38LQ9Y2H1 464 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.47□□□□□ -1.21
TDP1-209ENST00000554180 PRKAB1Q9Y478 270 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 GPSM3Q9Y4H4 160 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 GON4LQ3T8J9 2241 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 NCF1BA6NI72 391 aaPredicted RBP7.46□□□□□ -1.22
TDP1-209ENST00000554180 NCF1CA8MVU1 366 aaPredicted RBP7.46□□□□□ -1.22
TDP1-209ENST00000554180 MYO1CO00159 1063 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 TLR4O00206 839 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 VILLO15195 856 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 BCAT2O15382 392 aaPredicted RBP7.46□□□□□ -1.22
TDP1-209ENST00000554180 C1orf105O95561 183 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 MLYCDO95822 493 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 TNFP01375 233 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 WNT1P04628 370 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 NCF1P14598 390 aaPredicted RBP7.46□□□□□ -1.22
TDP1-209ENST00000554180 SLC2A4P14672 509 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 DRD4P21917 467 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 NDUFS1P28331 727 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 EEF1DP29692 281 aaKnown RBP7.46□□□□□ -1.22
TDP1-209ENST00000554180 HOXD12P35452 270 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 HSD17B2P37059 387 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 HALP42357 657 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 SEC24CP53992 1094 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 ABRQ12979 859 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 LCP2Q13094 533 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 PRKAA1Q13131 559 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 EIF2B5Q13144 721 aaKnown RBP7.46□□□□□ -1.22
TDP1-209ENST00000554180 ARHGAP19Q14CB8 494 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 TERF2Q15554 542 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 TEAD4Q15561 434 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.46□□□□□ -1.22
TDP1-209ENST00000554180 CES4AQ5XG92 561 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 LYSMD4Q5XG99 296 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 ANKS6Q68DC2 871 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 CAPRIN2Q6IMN6 1127 aaKnown RBP7.46□□□□□ -1.22
TDP1-209ENST00000554180 ABRAXAS1Q6UWZ7 409 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 LRRC70Q7Z2Q7 622 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 CRLF3Q8IUI8 442 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 HID1Q8IV36 788 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 KLHDC8AQ8IYD2 350 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 TMEFF1Q8IYR6 380 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 TBC1D21Q8IYX1 336 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 PHACTR4Q8IZ21 702 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 SDR16C5Q8N3Y7 309 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 CHCHD4Q8N4Q1 142 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 CCNYL1Q8N7R7 359 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 OR5K2Q8NHB8 316 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 GPBAR1Q8TDU6 330 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 ZNF483Q8TF39 744 aaPredicted RBP7.46□□□□□ -1.22
TDP1-209ENST00000554180 TFGQ92734 400 aaPredicted RBP7.46□□□□□ -1.22
TDP1-209ENST00000554180 TSACCQ96A04 125 aaPredicted RBP7.46□□□□□ -1.22
TDP1-209ENST00000554180 RAD51AP1Q96B01 352 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 FBXL8Q96CD0 374 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 ZC3H10Q96K80 434 aaKnown RBP7.46□□□□□ -1.22
TDP1-209ENST00000554180 CCT8L2Q96SF2 557 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 SORT1Q99523 831 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 EGFL8Q99944 293 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 GSDMCQ9BYG8 508 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 ZDHHC5Q9C0B5 715 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 OSGEPL1Q9H4B0 414 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 GSTO2Q9H4Y5 243 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 MVB12BQ9H7P6 319 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 ZSCAN32Q9NX65 697 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 UTP6Q9NYH9 597 aaKnown RBP7.46□□□□□ -1.22
TDP1-209ENST00000554180 WWOXQ9NZC7 414 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 TSR3Q9UJK0 312 aaKnown RBP7.46□□□□□ -1.22
TDP1-209ENST00000554180 PCTPQ9UKL6 214 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 KCNK6Q9Y257 313 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 INVSQ9Y283 1065 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 ASF1AQ9Y294 204 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 RAP2CQ9Y3L5 183 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 HEBP2Q9Y5Z4 205 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 SLCO1B1Q9Y6L6 691 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 DOCK9Q9BZ29 2069 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 CACNA1HO95180 2353 aa7.46□□□□□ -1.22
TDP1-209ENST00000554180 KNL1Q8NG31 2342 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 A0A1B0GTW7 788 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 A6NCN8 305 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 OR5K4A6NMS3 321 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 ZNF839A8K0R7 811 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 PDZK1P1A8MUH7 402 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 SLCO1B7G3V0H7 640 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms