RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 KLC3Q6P597 504 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 SYCE2Q6PIF2 218 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 LINGO4Q6UY18 593 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 GBP6Q6ZN66 633 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 COLCA1Q6ZS62 124 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 Q75L30 129 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 ACVR1CQ8NER5 493 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 WASF1Q92558 559 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 RND1Q92730 232 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 RPL36ALQ969Q0 106 aaKnown RBP4.48□□□□□ -1.69
PABPN1-204ENST00000554062 CABS1Q96KC9 395 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 ZNF582Q96NG8 517 aaPredicted RBP4.48□□□□□ -1.69
PABPN1-204ENST00000554062 MYADMQ96S97 322 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 PARK7Q99497 189 aaKnown RBP4.48□□□□□ -1.69
PABPN1-204ENST00000554062 CPNE1Q99829 537 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 NEURL2Q9BR09 285 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 C16orf70Q9BSU1 422 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 ACAT2Q9BWD1 397 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 SPRY4Q9C004 299 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 RAB6CQ9H0N0 254 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 MRPL44Q9H9J2 332 aaKnown RBP4.48□□□□□ -1.69
PABPN1-204ENST00000554062 ZBTB40Q9NUA8 1239 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 ZNF224Q9NZL3 707 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 C1RLQ9NZP8 487 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 SIX4Q9UIU6 781 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 ING1Q9UK53 422 aaPredicted RBP4.48□□□□□ -1.69
PABPN1-204ENST00000554062 PADI3Q9ULW8 664 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 PADI2Q9Y2J8 665 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 TEX14Q8IWB6 1497 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 FRMPD1Q5SYB0 1578 aa4.48□□□□□ -1.69
PABPN1-204ENST00000554062 FHOD3Q2V2M9 1422 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 CD109Q6YHK3 1445 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 LY6G6EA0A0G2JKS1 128 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 PRSS51A0A1B0GVH4 220 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 OR5K3A6NET4 321 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 NEMP2A6NFY4 417 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 KRTAP9-7A8MTY7 169 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 HEPACAM2A8MVW5 462 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 PROB1E7EW31 1015 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 RNASEH1O60930 286 aaKnown RBP4.47□□□□□ -1.69
PABPN1-204ENST00000554062 DDNO94850 711 aaPredicted RBP4.47□□□□□ -1.69
PABPN1-204ENST00000554062 BMP10O95393 424 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 GLUD1P00367 558 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 INHBAP08476 426 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 HOXC6P09630 235 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 SPP1P10451 314 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 TMPOP42166 694 aaKnown RBP4.47□□□□□ -1.69
PABPN1-204ENST00000554062 GLUD2P49448 558 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 KRTAP10-2P60368 255 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 ST8SIA6P61647 398 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 SSBP2P81877 361 aaPredicted RBP4.47□□□□□ -1.69
PABPN1-204ENST00000554062 TRAF1Q13077 416 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 ITGA7Q13683 1181 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 ZNF234Q14588 700 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 MDH1BQ5I0G3 518 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.47□□□□□ -1.69
PABPN1-204ENST00000554062 TXNRD3NBQ6F5E7 133 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 DSG4Q86SJ6 1040 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 GGNQ86UU5 652 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 EXOC3L1Q86VI1 746 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 CREBRFQ8IUR6 639 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 SPATA20Q8TB22 786 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 SLC38A5Q8WUX1 472 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 RAD54LQ92698 747 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 PHF21AQ96BD5 680 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 ZG16BQ96DA0 208 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 OTUB1Q96FW1 271 aaPredicted RBP4.47□□□□□ -1.69
PABPN1-204ENST00000554062 KATNB1Q9BVA0 655 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 FKRPQ9H9S5 495 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 TBC1D17Q9HA65 648 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 CDH20Q9HBT6 801 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 TCP11L1Q9NUJ3 509 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 TMEM161AQ9NX61 479 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 SPHK1Q9NYA1 384 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 TRPC4Q9UBN4 977 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 MTUS1Q9ULD2 1270 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 KCNK7Q9Y2U2 307 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.47□□□□□ -1.697e-16■■■□□ 15.9
PABPN1-204ENST00000554062 SNX9Q9Y5X1 595 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 GPRASP1Q5JY77 1395 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 NEO1Q92859 1461 aa4.47□□□□□ -1.69
PABPN1-204ENST00000554062 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.46□□□□□ -1.69
PABPN1-204ENST00000554062 BECN2A8MW95 431 aa4.46□□□□□ -1.7
PABPN1-204ENST00000554062 TNFRSF13BO14836 293 aaPredicted RBP4.46□□□□□ -1.7
PABPN1-204ENST00000554062 AP5Z1O43299 807 aa4.46□□□□□ -1.7
PABPN1-204ENST00000554062 ZBTB14O43829 449 aa4.46□□□□□ -1.7
PABPN1-204ENST00000554062 PPFIA2O75334 1257 aa4.46□□□□□ -1.7
PABPN1-204ENST00000554062 RAD51DO75771 328 aa4.46□□□□□ -1.7
PABPN1-204ENST00000554062 PDE9AO76083 593 aa4.46□□□□□ -1.7
PABPN1-204ENST00000554062 FSHBP01225 129 aa4.46□□□□□ -1.7
PABPN1-204ENST00000554062 IGHV2-70P01814 119 aa4.46□□□□□ -1.7
PABPN1-204ENST00000554062 MT-ND3P03897 115 aa4.46□□□□□ -1.7
PABPN1-204ENST00000554062 SNRNP70P08621 437 aaKnown RBP4.46□□□□□ -1.7
PABPN1-204ENST00000554062 FAM106CPP0CH98 169 aa4.46□□□□□ -1.7
PABPN1-204ENST00000554062 C8orf89P0DMQ9 161 aa4.46□□□□□ -1.7
PABPN1-204ENST00000554062 CSF2RAP15509 400 aa4.46□□□□□ -1.7
PABPN1-204ENST00000554062 EPCAMP16422 314 aa4.46□□□□□ -1.7
PABPN1-204ENST00000554062 S1PR1P21453 382 aa4.46□□□□□ -1.7
PABPN1-204ENST00000554062 WNT5AP41221 380 aa4.46□□□□□ -1.7
PABPN1-204ENST00000554062 FRKP42685 505 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms