RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 DENND2CQ68D51 928 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 DUPD1Q68J44 220 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 SLC6A19Q695T7 634 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 PDPK2PQ6A1A2 396 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 HIBCHQ6NVY1 386 aaPredicted RBP7.55□□□□□ -1.2
ABCD4-220ENST00000553998 C8orf74Q6P047 294 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 TMEM26Q6ZUK4 368 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 ZNF534Q76KX8 674 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 MARK2Q7KZI7 788 aaKnown RBP7.55□□□□□ -1.2
ABCD4-220ENST00000553998 CHST15Q7LFX5 561 aaPredicted RBP7.55□□□□□ -1.2
ABCD4-220ENST00000553998 TRIM74Q86UV6 250 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 RBMXL3Q8N7X1 1067 aaKnown RBP7.55□□□□□ -1.2
ABCD4-220ENST00000553998 STYXQ8WUJ0 223 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 EID2BQ96D98 161 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 SNRNP40Q96DI7 357 aaKnown RBP7.55□□□□□ -1.2
ABCD4-220ENST00000553998 SLC41A2Q96JW4 573 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 C5orf34Q96MH7 638 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 SERPINB12Q96P63 405 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 SMAD5Q99717 465 aaKnown RBP7.55□□□□□ -1.2
ABCD4-220ENST00000553998 FAM129AQ9BZQ8 928 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 MRM3Q9HC36 420 aaKnown RBP7.55□□□□□ -1.2
ABCD4-220ENST00000553998 SLAMF7Q9NQ25 335 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 ACSS2Q9NR19 701 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 IL17CQ9P0M4 197 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 WHRNQ9P202 907 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 ZNHIT2Q9UHR6 403 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 CD84Q9UIB8 345 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 ENTPD4Q9Y227 616 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 FARSAQ9Y285 508 aaKnown RBP7.55□□□□□ -1.2
ABCD4-220ENST00000553998 PDZD2O15018 2839 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 HIVEP3Q5T1R4 2406 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 MED13Q9UHV7 2174 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 SHANK1Q9Y566 2161 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 ESPL1Q14674 2120 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 MROH6A6NGR9 719 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 ARGFXA6NJG6 315 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 SDR42E2A6NKP2 422 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 H7C0S8 307 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 AURKAO14965 403 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 HNRNPRO43390 633 aaKnown RBP7.54□□□□□ -1.2
ABCD4-220ENST00000553998 LDB2O43679 373 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 NUAK1O60285 661 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 TIAF1O95411 115 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 PRF1P14222 555 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 BPIP17213 487 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 TPH1P17752 444 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 SPAM1P38567 509 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 SLC19A1P41440 591 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 MAPK9P45984 424 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 CAPZBP47756 277 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 PPM1FP49593 454 aaPredicted RBP7.54□□□□□ -1.2
ABCD4-220ENST00000553998 SEPHS1P49903 392 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 SESN2P58004 480 aaPredicted RBP7.54□□□□□ -1.2
ABCD4-220ENST00000553998 RPS15P62841 145 aaKnown RBP7.54□□□□□ -1.2
ABCD4-220ENST00000553998 CAV1Q03135 178 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 IL10RAQ13651 578 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 POU6F1Q14863 301 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 PWWP2BQ6NUJ5 590 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 CAND1Q86VP6 1230 aaKnown RBP7.54□□□□□ -1.2
ABCD4-220ENST00000553998 RBM12BQ8IXT5 1001 aaKnown RBP7.54□□□□□ -1.2
ABCD4-220ENST00000553998 PDIK1LQ8N165 341 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 TRAM1L1Q8N609 369 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 PPHLN1Q8NEY8 458 aaKnown RBP7.54□□□□□ -1.2
ABCD4-220ENST00000553998 FDCSPQ8NFU4 85 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 LRRC39Q96DD0 335 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 MOCOSQ96EN8 888 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 C19orf60Q96EN9 201 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 TGM7Q96PF1 710 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 RUFY1Q96T51 708 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 LRRC1Q9BTT6 524 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 ZSCAN5AQ9BUG6 496 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 RIOK2Q9BVS4 552 aaKnown RBP7.54□□□□□ -1.2
ABCD4-220ENST00000553998 KIFC1Q9BW19 673 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 NUDT9Q9BW91 350 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 CARD6Q9BX69 1037 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 TRIM31Q9BZY9 425 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 PHACTR1Q9C0D0 580 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 PDE7BQ9NP56 450 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 IL26Q9NPH9 171 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 NLE1Q9NVX2 485 aaPredicted RBP7.54□□□□□ -1.2
ABCD4-220ENST00000553998 SCHIP1Q9P0W5 487 aaPredicted RBP7.54□□□□□ -1.2
ABCD4-220ENST00000553998 C5AR2Q9P296 337 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 ZNF624Q9P2J8 865 aaPredicted RBP7.54□□□□□ -1.2
ABCD4-220ENST00000553998 LNPEPQ9UIQ6 1025 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 ANAPC5Q9UJX4 755 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 KCNK6Q9Y257 313 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 SNX24Q9Y343 169 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 PRKAB1Q9Y478 270 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 TCAF1Q9Y4C2 921 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 ARL5AQ9Y689 179 aa7.54□□□□□ -1.2
ABCD4-220ENST00000553998 CELSR1Q9NYQ6 3014 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 SETD2Q9BYW2 2564 aaPredicted RBP7.53□□□□□ -1.2
ABCD4-220ENST00000553998 GLYATL1P3A0A0U1RQE8 302 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 A0A0U1RQS6 177 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 FAM237BA0A1B0GVD1 139 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 GPR89AB7ZAQ6 455 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 GOLGA8MH3BSY2 632 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 CHUKO15111 745 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 TP73O15350 636 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 EIF3HO15372 352 aaKnown RBP eCLIP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms