RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 CRHR1P34998 444 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 DRD3P35462 400 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 UGT1A3P35503 534 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 UGT1A5P35504 534 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 RGS4P49798 205 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 CCR3P51677 355 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 RAB10P61026 200 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 IL9RQ01113 521 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 PLOD1Q02809 727 aaPredicted RBP4.94□□□□□ -1.62
VTI1B-202ENST00000553619 ASPHQ12797 758 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 RALGDSQ12967 914 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 PTPRCAPQ14761 206 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 FAM83EQ2M2I3 478 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 TTLL9Q3SXZ7 439 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 USP39Q53GS9 565 aaKnown RBP4.94□□□□□ -1.62
VTI1B-202ENST00000553619 TTMPQ5BVD1 217 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 HENMT1Q5T8I9 393 aaKnown RBP4.94□□□□□ -1.62
VTI1B-202ENST00000553619 PIP5KL1Q5T9C9 394 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 HECTD2Q5U5R9 776 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 AGAP9Q5VTM2 703 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 HHATQ5VTY9 493 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 RAET1GQ6H3X3 334 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 LRRC8EQ6NSJ5 796 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 KIAA1211LQ6NV74 962 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 CNSTQ6PJW8 725 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 SLC36A4Q6YBV0 504 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 KYAT3Q6YP21 454 aaKnown RBP4.94□□□□□ -1.62
VTI1B-202ENST00000553619 KDM7AQ6ZMT4 941 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 HSD11B1LQ7Z5J1 315 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 TBC1D1Q86TI0 1168 aaPredicted RBP4.94□□□□□ -1.62
VTI1B-202ENST00000553619 SERPINA9Q86WD7 417 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 HORMAD1Q86X24 394 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 PHYKPLQ8IUZ5 450 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 SFTPA1Q8IWL2 248 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 UNC5BQ8IZJ1 945 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 NXPE1Q8N323 547 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 DCLK2Q8N568 766 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 GPATCH11Q8N954 259 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 DENND6BQ8NEG7 585 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 PJA1Q8NG27 643 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 OR2T34Q8NGX1 318 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 BTN2A2Q8WVV5 523 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 HMGB4Q8WW32 186 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 DYDC1Q8WWB3 177 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 INPP5DQ92835 1189 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 EDAQ92838 391 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 GLYATL1Q969I3 302 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 FAM131CQ96AQ9 280 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 DACT3Q96B18 629 aaPredicted RBP4.94□□□□□ -1.62
VTI1B-202ENST00000553619 CENPTQ96BT3 561 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 EID2BQ96D98 161 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 DTD2Q96FN9 168 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 ZNF514Q96K75 400 aaPredicted RBP4.94□□□□□ -1.62
VTI1B-202ENST00000553619 LENG8Q96PV6 779 aaPredicted RBP4.94□□□□□ -1.62
VTI1B-202ENST00000553619 SELENOSQ9BQE4 189 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 AARSD1Q9BTE6 412 aaKnown RBP4.94□□□□□ -1.62
VTI1B-202ENST00000553619 WRAP53Q9BUR4 548 aaKnown RBP4.94□□□□□ -1.62
VTI1B-202ENST00000553619 RIOK2Q9BVS4 552 aaKnown RBP4.94□□□□□ -1.62
VTI1B-202ENST00000553619 FAM126AQ9BYI3 521 aaPredicted RBP4.94□□□□□ -1.62
VTI1B-202ENST00000553619 SLC17A9Q9BYT1 436 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 PCED1AQ9H1Q7 454 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 EPHX3Q9H6B9 360 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 UGT1A7Q9HAW7 530 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 UGT1A10Q9HAW8 530 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 UGT1A8Q9HAW9 530 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 NMRAL1Q9HBL8 299 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 TRIM39Q9HCM9 518 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 FBXO6Q9NRD1 293 aaPredicted RBP4.94□□□□□ -1.62
VTI1B-202ENST00000553619 PHPT1Q9NRX4 125 aaPredicted RBP4.94□□□□□ -1.62
VTI1B-202ENST00000553619 INTS9Q9NV88 658 aaKnown RBP4.94□□□□□ -1.62
VTI1B-202ENST00000553619 FAM86C1Q9NVL1 165 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 SMOXQ9NWM0 555 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 EURLQ9NYK6 297 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 IL1RAPL1Q9NZN1 696 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 GPR34Q9UPC5 381 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 CRYL1Q9Y2S2 319 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 COL4A2P08572 1712 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 MUC22E2RYF6 1773 aaPredicted RBP4.93□□□□□ -1.62
VTI1B-202ENST00000553619 MYLKQ15746 1914 aa4.93□□□□□ -1.62
VTI1B-202ENST00000553619 A0A096LPK6 155 aa4.93□□□□□ -1.62
VTI1B-202ENST00000553619 CCDC163A0A0D9SF12 145 aa4.93□□□□□ -1.62
VTI1B-202ENST00000553619 C17orf113A0A1B0GUU1 675 aa4.93□□□□□ -1.62
VTI1B-202ENST00000553619 A0A1W2PPM1 405 aa4.93□□□□□ -1.62
VTI1B-202ENST00000553619 PABPN1LA6NDY0 278 aaKnown RBP4.93□□□□□ -1.62
VTI1B-202ENST00000553619 IGLON5A6NGN9 336 aa4.93□□□□□ -1.62
VTI1B-202ENST00000553619 SHISA7A6NL88 538 aa4.93□□□□□ -1.62
VTI1B-202ENST00000553619 GPR89AB7ZAQ6 455 aa4.93□□□□□ -1.62
VTI1B-202ENST00000553619 EIF3FO00303 357 aaPredicted RBP4.93□□□□□ -1.62
VTI1B-202ENST00000553619 CACNB4O00305 520 aaPredicted RBP4.93□□□□□ -1.62
VTI1B-202ENST00000553619 FPGTO14772 594 aa4.93□□□□□ -1.62
VTI1B-202ENST00000553619 DCXO43602 365 aa4.93□□□□□ -1.62
VTI1B-202ENST00000553619 FOXD2O60548 495 aaPredicted RBP4.93□□□□□ -1.62
VTI1B-202ENST00000553619 RFPL1O75677 317 aa4.93□□□□□ -1.62
VTI1B-202ENST00000553619 CDK14O94921 469 aa4.93□□□□□ -1.62
VTI1B-202ENST00000553619 KLHL2O95198 593 aa4.93□□□□□ -1.62
VTI1B-202ENST00000553619 ASMTLO95671 621 aa4.93□□□□□ -1.62
VTI1B-202ENST00000553619 PAK4O96013 591 aaPredicted RBP4.93□□□□□ -1.62
VTI1B-202ENST00000553619 IGLV3-19P01714 112 aa4.93□□□□□ -1.62
VTI1B-202ENST00000553619 TP53P04637 393 aaPredicted RBP4.93□□□□□ -1.62
VTI1B-202ENST00000553619 C2P06681 752 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms