RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 ZNF362Q5T0B9 420 aaPredicted RBP11.38□□□□□ -0.59
PPFIA2-227ENST00000552948 DEPDC1Q5TB30 811 aa11.38□□□□□ -0.59
PPFIA2-227ENST00000552948 GTF2H2CQ6P1K8 395 aa11.38□□□□□ -0.59
PPFIA2-227ENST00000552948 LRRC49Q8IUZ0 686 aa11.38□□□□□ -0.59
PPFIA2-227ENST00000552948 PHYKPLQ8IUZ5 450 aa11.38□□□□□ -0.59
PPFIA2-227ENST00000552948 MINDY2Q8NBR6 621 aa11.38□□□□□ -0.59
PPFIA2-227ENST00000552948 OR6Q1Q8NGQ2 317 aa11.38□□□□□ -0.59
PPFIA2-227ENST00000552948 RHEBL1Q8TAI7 183 aa11.38□□□□□ -0.59
PPFIA2-227ENST00000552948 PGAP3Q96FM1 320 aaPredicted RBP11.38□□□□□ -0.59
PPFIA2-227ENST00000552948 ZNF583Q96ND8 569 aa11.38□□□□□ -0.59
PPFIA2-227ENST00000552948 SEPT5Q99719 369 aaPredicted RBP11.38□□□□□ -0.59
PPFIA2-227ENST00000552948 KCNS3Q9BQ31 491 aa11.38□□□□□ -0.59
PPFIA2-227ENST00000552948 COPS4Q9BT78 406 aa11.38□□□□□ -0.59
PPFIA2-227ENST00000552948 ZBED2Q9BTP6 218 aa11.38□□□□□ -0.59
PPFIA2-227ENST00000552948 NSUN3Q9H649 340 aaKnown RBP11.38□□□□□ -0.59
PPFIA2-227ENST00000552948 ANKMY1Q9P2S6 941 aa11.38□□□□□ -0.59
PPFIA2-227ENST00000552948 IKZF3Q9UKT9 509 aa11.38□□□□□ -0.59
PPFIA2-227ENST00000552948 ST3GAL5Q9UNP4 418 aa11.38□□□□□ -0.59
PPFIA2-227ENST00000552948 C17orf102A2RUQ5 167 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 RFPL2O75678 378 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 OTCP00480 354 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 RGS4P49798 205 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 DUSP28Q4G0W2 176 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 MSANTD2Q6P1R3 559 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 AFTPHQ6ULP2 937 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 SPATC1Q76KD6 591 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 UBE2J2Q8N2K1 259 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 ATL1Q8WXF7 558 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 DERL2Q9GZP9 239 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 CLPBQ9H078 707 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 RNF38Q9H0F5 515 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 TPK1Q9H3S4 243 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 RMND5AQ9H871 391 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 ZBTB20Q9HC78 741 aaPredicted RBP11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 SCUBE2Q9NQ36 999 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 POLR3BQ9NW08 1133 aaPredicted RBP11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 C14orf119Q9NWQ9 140 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 ZNF451Q9Y4E5 1061 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 JRKO75564 520 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 PAPSS2O95340 614 aaPredicted RBP11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 DNTTP04053 509 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 ITIH1P19827 911 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 GRK4P32298 578 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 GNPDA1P46926 289 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 PPP5CP53041 499 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 SELENBP1Q13228 472 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 TPRG1LQ5T0D9 272 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 AGAP7PQ5VUJ5 663 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 FBXL22Q6P050 247 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 DOK6Q6PKX4 331 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 ALKAL1Q6UXT8 129 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 Q6ZSR9 355 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 OR52J3Q8NH60 311 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 NETO1Q8TDF5 533 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 CNDP2Q96KP4 475 aaKnown RBP11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 CARS2Q9HA77 564 aaKnown RBP11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 MARCH2Q9P0N8 246 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 SMIM35A0A1B0GVV1 85 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 RFXANKO14593 260 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 CXCL11O14625 94 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 NDST3O95803 873 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 ABCB1P08183 1280 aaPredicted RBP11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 RHOQP17081 205 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 PHC1P78364 1004 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 FAM189BP81408 668 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 TAB1Q15750 504 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 CTF1Q16619 201 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 PIK3R6Q5UE93 754 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 DESI1Q6ICB0 168 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 CCBE1Q6UXH8 406 aaPredicted RBP11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 BEND5Q7L4P6 421 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 LINC01465Q8N7H1 131 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 SELENOMQ8WWX9 145 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 ELOVL6Q9H5J4 265 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 LRTM1Q9HBL6 345 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 SMPD4Q9NXE4 827 aa11.37□□□□□ -0.59
PPFIA2-227ENST00000552948 LOC110117498-PIK3R3F6TDL0 507 aa11.36□□□□□ -0.59
PPFIA2-227ENST00000552948 CTPS1P17812 591 aa11.36□□□□□ -0.59
PPFIA2-227ENST00000552948 GPR15P49685 360 aa11.36□□□□□ -0.59
PPFIA2-227ENST00000552948 PSEN2P49810 448 aa11.36□□□□□ -0.59
PPFIA2-227ENST00000552948 NFKB2Q00653 900 aa11.36□□□□□ -0.59
PPFIA2-227ENST00000552948 TP53BP2Q13625 1128 aa11.36□□□□□ -0.59
PPFIA2-227ENST00000552948 PTPRRQ15256 657 aa11.36□□□□□ -0.59
PPFIA2-227ENST00000552948 MED22Q15528 200 aa11.36□□□□□ -0.59
PPFIA2-227ENST00000552948 NKG7Q16617 165 aa11.36□□□□□ -0.59
PPFIA2-227ENST00000552948 SLC16A12Q6ZSM3 486 aa11.36□□□□□ -0.59
PPFIA2-227ENST00000552948 LRRTM3Q86VH5 581 aa11.36□□□□□ -0.59
PPFIA2-227ENST00000552948 MBOAT4Q96T53 435 aa11.36□□□□□ -0.59
PPFIA2-227ENST00000552948 SMOC2Q9H3U7 446 aa11.36□□□□□ -0.59
PPFIA2-227ENST00000552948 ABHD16BQ9H3Z7 469 aa11.36□□□□□ -0.59
PPFIA2-227ENST00000552948 FARSBQ9NSD9 589 aaKnown RBP11.36□□□□□ -0.59
PPFIA2-227ENST00000552948 C1orf109Q9NX04 203 aa11.36□□□□□ -0.59
PPFIA2-227ENST00000552948 IL37Q9NZH6 218 aa11.36□□□□□ -0.59
PPFIA2-227ENST00000552948 ZNF221Q9UK13 617 aa11.36□□□□□ -0.59
PPFIA2-227ENST00000552948 DNAJC25-GNG10A0A024R161 153 aa11.36□□□□□ -0.59
PPFIA2-227ENST00000552948 A0A1W2PQ67 120 aa11.36□□□□□ -0.59
PPFIA2-227ENST00000552948 ILVBLA1L0T0 632 aa11.36□□□□□ -0.59
PPFIA2-227ENST00000552948 ARL5CA6NH57 179 aa11.36□□□□□ -0.59
PPFIA2-227ENST00000552948 CENPXA8MT69 81 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms