RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 FOLR3P41439 243 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 CA7P43166 264 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 KIR3DL1P43629 444 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 FOXL2P58012 376 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 GNG11P61952 73 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 TLR1Q15399 786 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 BOLA3Q53S33 107 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 AGAP7PQ5VUJ5 663 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 PRAMEF13Q5VWM6 474 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 MLIPQ5VWP3 458 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 MTFR2Q6P444 385 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 SLC35F6Q8N357 371 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 NR4A3Q92570 626 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 NACC2Q96BF6 587 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 AGAP4Q96P64 663 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 TAAR6Q96RI8 345 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 TRIB3Q96RU7 358 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 MAGEE1Q9HCI5 957 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 SLC6A20Q9NP91 592 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 NENFQ9UMX5 172 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 DNMT3AQ9Y6K1 912 aaPredicted RBP11□□□□□ -0.65
SUPT16H-202ENST00000552829 E7EQ34 232 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 CCL21O00585 134 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 KIF5CO60282 957 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 POLR2CP19387 275 aaPredicted RBP10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 CDH3P22223 829 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 CCNCP24863 283 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 GABRA4P48169 554 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 CTSCP53634 463 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 ADORA2A-AS1P86434 159 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 KIF5AQ12840 1032 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 NFE2L1Q14494 772 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 CYP2A13Q16696 494 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 ATP13A5Q4VNC0 1218 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 RHBDD2Q6NTF9 364 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 ARMC6Q6NXE6 501 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 ALKBH5Q6P6C2 394 aaKnown RBP10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 RASGEF1AQ8N9B8 481 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 CATSPER1Q8NEC5 780 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 FAM71BQ8TC56 605 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 BRSK1Q8TDC3 778 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 LMF1Q96S06 567 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 ADGRE3Q9BY15 652 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 TSGA10Q9BZW7 698 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 MCCC2Q9HCC0 563 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 PCDH18Q9HCL0 1135 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 LUC7LQ9NQ29 371 aaKnown RBP10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 FBXL4Q9UKA2 621 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 SHOC2Q9UQ13 582 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 CDYLQ9Y232 598 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 CFAP20Q9Y6A4 193 aaKnown RBP10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 DUSP10Q9Y6W6 482 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 AKAP6Q13023 2319 aa10.99□□□□□ -0.65
SUPT16H-202ENST00000552829 CCDC66A2RUB6 948 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 KIF2AO00139 706 aaPredicted RBP10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 SOCS6O14544 535 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 PJA2O43164 708 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 MFSD11O43934 449 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 H2AFZP0C0S5 128 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 PIRTP0C851 137 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 RARAP10276 462 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 MMP11P24347 488 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 PRDX3P30048 256 aaKnown RBP10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 CASQ1P31415 396 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 CD86P42081 329 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 LMAN1P49257 510 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 ETF1P62495 437 aaKnown RBP10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 DCDP81605 110 aaKnown RBP10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 PRKD1Q15139 912 aaPredicted RBP10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 CDSNQ15517 529 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 SMTNL2Q2TAL5 461 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 TXNRD3NBQ6F5E7 133 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 TIGD7Q6NT04 549 aaPredicted RBP10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 CDHR3Q6ZTQ4 885 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 H2AFVQ71UI9 128 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 OR4E2Q8NGC2 313 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 PROKR1Q8TCW9 393 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 DTX3LQ8TDB6 740 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 TEKT4Q8WW24 435 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 CNDP1Q96KN2 507 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 SPOCK3Q9BQ16 436 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 TREX2Q9BQ50 279 aaPredicted RBP10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 SLC22A11Q9NSA0 550 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 IMP3Q9NV31 184 aaKnown RBP10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 GPN3Q9UHW5 284 aaPredicted RBP10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 ZNF711Q9Y462 761 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 AP1M2Q9Y6Q5 423 aa10.98□□□□□ -0.65
SUPT16H-202ENST00000552829 INTS1Q8N201 2190 aaKnown RBP10.97□□□□□ -0.65
SUPT16H-202ENST00000552829 TRGV8A0A0C4DH27 118 aa10.97□□□□□ -0.65
SUPT16H-202ENST00000552829 FAM221AA4D161 298 aa10.97□□□□□ -0.65
SUPT16H-202ENST00000552829 MATN2O00339 956 aa10.97□□□□□ -0.65
SUPT16H-202ENST00000552829 FANCGO15287 622 aa10.97□□□□□ -0.65
SUPT16H-202ENST00000552829 HCRTR1O43613 425 aa10.97□□□□□ -0.65
SUPT16H-202ENST00000552829 ALOX12BO75342 701 aa10.97□□□□□ -0.65
SUPT16H-202ENST00000552829 FAM155BO75949 473 aa10.97□□□□□ -0.65
SUPT16H-202ENST00000552829 KLHL18O94889 574 aa10.97□□□□□ -0.65
SUPT16H-202ENST00000552829 GCGRP47871 477 aa10.97□□□□□ -0.65
SUPT16H-202ENST00000552829 NAP1L1P55209 391 aaKnown RBP10.97□□□□□ -0.65
SUPT16H-202ENST00000552829 MFAP5Q13361 173 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms