RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 ZDHHC6Q9H6R6 413 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 SMURF2Q9HAU4 748 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 AASSQ9UDR5 926 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 ROBO1Q9Y6N7 1651 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 MID1O15344 667 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 REM1O75628 298 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 IL1BP01584 269 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 ALDOAP04075 364 aaKnown RBP15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 RPL9P32969 192 aaKnown RBP15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 RPL4P36578 427 aaKnown RBP15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 DGKQP52824 942 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 MYBPC1Q00872 1141 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 NFATC3Q12968 1075 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 LAPTM5Q13571 262 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 SLC2A7Q6PXP3 512 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 DENND1CQ8IV53 801 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 PHC2Q8IXK0 858 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 FIBCD1Q8N539 461 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 HNRNPABQ99729 332 aaKnown RBP15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 SLC39A8Q9C0K1 460 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 FBRSL1Q9HCM7 1045 aaKnown RBP15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 FBXW11Q9UKB1 542 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 SPIN1Q9Y657 262 aaPredicted RBP15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 HTR3EA5X5Y0 456 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 PRKACGP22612 351 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 NUDT6P53370 316 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 HECTD3Q5T447 861 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 TMEM236Q5W0B7 351 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 ANKRD13BQ86YJ7 626 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 CHPFQ8IZ52 775 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 CLEC4CQ8WTT0 213 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 KCTD7Q96MP8 289 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 ZNF641Q96N77 438 aaPredicted RBP15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 MNTQ99583 582 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 ACAT2Q9BWD1 397 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 DPEP3Q9H4B8 488 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 MAFBQ9Y5Q3 323 aaPredicted RBP15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 SNX10Q9Y5X0 201 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 DYRK3O43781 588 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 DSC3Q14574 896 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 TBRG1Q3YBR2 411 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 ZNF730Q6ZMV8 503 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 ZBTB2Q8N680 514 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 FBXO27Q8NI29 283 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 XAGE5Q8WWM1 108 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 RFKQ969G6 155 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 RACGAP1Q9H0H5 632 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 ITM2CQ9NQX7 267 aa15.54■□□□□ 0.08
RBFOX1-212ENST00000550418 PHLPP1O60346 1717 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 ZNF879B4DU55 563 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 PER2O15055 1255 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 RASAL1O95294 804 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 GM2AP17900 193 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 PBX3P40426 434 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 KCNAB2Q13303 367 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 ZBTB6Q15916 424 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 SDHAF4Q5VUM1 108 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 DSG4Q86SJ6 1040 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 ZNF433Q8N7K0 673 aaPredicted RBP15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 BRSK1Q8TDC3 778 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 BTN2A3PQ96KV6 586 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 ZFP3Q96NJ6 502 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 COL21A1Q96P44 957 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 GPR88Q9GZN0 384 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 PDZD7Q9H5P4 517 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 MYH7BA7E2Y1 1941 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 KPNA3O00505 521 aaPredicted RBP15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 KERAO60938 352 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 FGBP02675 491 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 URODP06132 367 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 PROZP22891 400 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 VARSP26640 1264 aaKnown RBP15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 NDUFV1P49821 464 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 CDH4P55283 916 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 UGT2A3Q6UWM9 527 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 ELMOD2Q8IZ81 293 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 KCNC2Q96PR1 638 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 OR2B2Q9GZK3 357 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 SMOXQ9NWM0 555 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 ZDHHC7Q9NXF8 308 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 TVP23BQ9NYZ1 205 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 HMGXB4Q9UGU5 601 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 ESR1P03372 595 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 FPR1P21462 350 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 MNDAP41218 407 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 BIKQ13323 160 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 ATP6AP1Q15904 470 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 DPY19L1Q2PZI1 675 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 CGB2Q6NT52 195 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 SLC38A4Q969I6 547 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 SLIT2O94813 1529 aa15.53■□□□□ 0.08
RBFOX1-212ENST00000550418 A8MV72 311 aaPredicted RBP15.52■□□□□ 0.08
RBFOX1-212ENST00000550418 NME6O75414 186 aaPredicted RBP15.52■□□□□ 0.08
RBFOX1-212ENST00000550418 HOXC6P09630 235 aa15.52■□□□□ 0.08
RBFOX1-212ENST00000550418 CSTF2P33240 577 aaKnown RBP eCLIP15.52■□□□□ 0.08
RBFOX1-212ENST00000550418 UFM1P61960 85 aa15.52■□□□□ 0.08
RBFOX1-212ENST00000550418 KLHL22Q53GT1 634 aa15.52■□□□□ 0.08
RBFOX1-212ENST00000550418 ITIH5Q86UX2 942 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms