RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-222	ENST00000550155	LRWD1	Q9UFC0	647 aa		3.97	□□□□□ -1.77
CNOT2-222	ENST00000550155	ASIC3	Q9UHC3	531 aa		3.97	□□□□□ -1.77
CNOT2-222	ENST00000550155	MOB4	Q9Y3A3	225 aa		3.97	□□□□□ -1.77
CNOT2-222	ENST00000550155	RIPK3	Q9Y572	518 aa		3.97	□□□□□ -1.77
CNOT2-222	ENST00000550155	COL5A2	P05997	1499 aa	Predicted RBP	3.97	□□□□□ -1.77
CNOT2-222	ENST00000550155	CDRT15L2	A8MXV6	281 aa		3.96	□□□□□ -1.78
CNOT2-222	ENST00000550155	KPNA7	A9QM74	516 aa		3.96	□□□□□ -1.78
CNOT2-222	ENST00000550155	GAPDHS	O14556	408 aa	Predicted RBP	3.96	□□□□□ -1.78
CNOT2-222	ENST00000550155	MBD4	O95243	580 aa		3.96	□□□□□ -1.78
CNOT2-222	ENST00000550155	VPREB1	P12018	145 aa		3.96	□□□□□ -1.78
CNOT2-222	ENST00000550155	PRLR	P16471	622 aa		3.96	□□□□□ -1.78
CNOT2-222	ENST00000550155	CA4	P22748	312 aa		3.96	□□□□□ -1.78
CNOT2-222	ENST00000550155	CCR10	P46092	362 aa		3.96	□□□□□ -1.78
CNOT2-222	ENST00000550155	GSDMD	P57764	484 aa		3.96	□□□□□ -1.78
CNOT2-222	ENST00000550155	HLA-B	Q31612	363 aa		3.96	□□□□□ -1.78
CNOT2-222	ENST00000550155	LRRTM1	Q86UE6	522 aa		3.96	□□□□□ -1.78
CNOT2-222	ENST00000550155	ADGRF2	Q8IZF7	708 aa		3.96	□□□□□ -1.78
CNOT2-222	ENST00000550155	OR4C3	Q8NH37	302 aa		3.96	□□□□□ -1.78
CNOT2-222	ENST00000550155	SRSF8	Q9BRL6	282 aa	Known RBP	3.96	□□□□□ -1.78
CNOT2-222	ENST00000550155	VN1R1	Q9GZP7	353 aa		3.96	□□□□□ -1.78
CNOT2-222	ENST00000550155	A4GALT	Q9NPC4	353 aa		3.96	□□□□□ -1.78
CNOT2-222	ENST00000550155	WDR37	Q9Y2I8	494 aa		3.96	□□□□□ -1.78
CNOT2-222	ENST00000550155	ZHX2	Q9Y6X8	837 aa		3.96	□□□□□ -1.78
CNOT2-222	ENST00000550155	ASTN2	O75129	1339 aa	Predicted RBP	3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	ZNF644	Q9H582	1327 aa	Predicted RBP	3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	EPB41L2	O43491	1005 aa	Known RBP	3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	MITF	O75030	526 aa	Predicted RBP	3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	MMP9	P14780	707 aa		3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	GATA1	P15976	413 aa	Predicted RBP	3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	NKX2-1	P43699	371 aa	Predicted RBP	3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	ARF3	P61204	181 aa	Predicted RBP	3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	ARF1	P84077	181 aa	Known RBP	3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	AIMP2	Q13155	320 aa	Known RBP	3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	ZNF239	Q16600	458 aa	Known RBP	3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	GRTP1	Q5TC63	336 aa		3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	TMCO3	Q6UWJ1	677 aa		3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	COMMD2	Q86X83	199 aa		3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	FAM114A1	Q8IWE2	563 aa		3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	PAPD5	Q8NDF8	572 aa	Known RBP	3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	OR5AP2	Q8NGF4	316 aa		3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	HDAC2	Q92769	488 aa	Known RBP	3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	SAT2	Q96F10	170 aa	Predicted RBP	3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	ZNF300	Q96RE9	604 aa	Predicted RBP	3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	PKP2	Q99959	881 aa		3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	SDR39U1	Q9NRG7	319 aa	Predicted RBP	3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	SEPT11	Q9NVA2	429 aa	Known RBP	3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	ERAP1	Q9NZ08	941 aa		3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	HACL1	Q9UJ83	578 aa		3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	GRIP1	Q9Y3R0	1128 aa		3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	SOS1	Q07889	1333 aa	Predicted RBP	3.95	□□□□□ -1.78
CNOT2-222	ENST00000550155	IGKV6D-41	A0A0C4DH26	115 aa		3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	HYKK	A2RU49	373 aa		3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	PI4KAP2	A4QPH2	592 aa		3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155		F5H0A9	414 aa	Predicted RBP	3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	KHDRBS3	O75525	346 aa	Known RBP	3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	DUS4L	O95620	317 aa	Known RBP	3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	CD4	P01730	458 aa		3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	ARSE	P51690	589 aa		3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	MFAP4	P55083	255 aa		3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	TMF1	P82094	1093 aa		3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	DMPK	Q09013	629 aa		3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	PNRC1	Q12796	327 aa	Predicted RBP	3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	NR1D2	Q14995	579 aa		3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	E2F5	Q15329	346 aa		3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	SNAI3	Q3KNW1	292 aa		3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	FIP1L1	Q6UN15	594 aa	Known RBP	3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	HOGA1	Q86XE5	327 aa		3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	MAPKAPK5-AS1	Q8N8E1	139 aa		3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	MOSPD2	Q8NHP6	518 aa		3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	LRRC59	Q96AG4	307 aa	Known RBP	3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	USP28	Q96RU2	1077 aa		3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	KRT12	Q99456	494 aa		3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	PIGQ	Q9BRB3	760 aa		3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	C16orf70	Q9BSU1	422 aa		3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	FNDC11	Q9BVV2	318 aa		3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	DGCR6L	Q9BY27	220 aa		3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	UPF3A	Q9H1J1	476 aa	Known RBP	3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	LARS	Q9P2J5	1176 aa	Known RBP	3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	RHCG	Q9UBD6	479 aa		3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155	GRID1	Q9ULK0	1009 aa		3.94	□□□□□ -1.78
CNOT2-222	ENST00000550155		A0A1W2PR77	199 aa		3.93	□□□□□ -1.78
CNOT2-222	ENST00000550155	CCDC189	A1A4V9	331 aa		3.93	□□□□□ -1.78
CNOT2-222	ENST00000550155	PGPEP1L	A6NFU8	196 aa		3.93	□□□□□ -1.78
CNOT2-222	ENST00000550155	ANKRD61	A6NGH8	418 aa		3.93	□□□□□ -1.78
CNOT2-222	ENST00000550155	TSPAN1	O60635	241 aa		3.93	□□□□□ -1.78
CNOT2-222	ENST00000550155	RNASEH1	O60930	286 aa	Known RBP	3.93	□□□□□ -1.78
CNOT2-222	ENST00000550155	GPI	P06744	558 aa		3.93	□□□□□ -1.78
CNOT2-222	ENST00000550155	ACADS	P16219	412 aa		3.93	□□□□□ -1.78
CNOT2-222	ENST00000550155	UGT1A4	P22310	534 aa		3.93	□□□□□ -1.78
CNOT2-222	ENST00000550155	SHC1	P29353	583 aa		3.93	□□□□□ -1.78
CNOT2-222	ENST00000550155	HUNK	P57058	714 aa		3.93	□□□□□ -1.78
CNOT2-222	ENST00000550155	MS4A2	Q01362	244 aa		3.93	□□□□□ -1.78
CNOT2-222	ENST00000550155	DRP2	Q13474	957 aa		3.93	□□□□□ -1.78
CNOT2-222	ENST00000550155	C20orf194	Q5TEA3	1177 aa		3.93	□□□□□ -1.78
CNOT2-222	ENST00000550155	LACC1	Q8IV20	430 aa		3.93	□□□□□ -1.78
CNOT2-222	ENST00000550155	CFAP206	Q8IYR0	622 aa		3.93	□□□□□ -1.78
CNOT2-222	ENST00000550155	TTC39C	Q8N584	583 aa		3.93	□□□□□ -1.78
CNOT2-222	ENST00000550155	AMER3	Q8N944	861 aa		3.93	□□□□□ -1.78
CNOT2-222	ENST00000550155	LMF2	Q9BU23	707 aa	Known RBP	3.93	□□□□□ -1.78
CNOT2-222	ENST00000550155	NUP85	Q9BW27	656 aa		3.93	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms