RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 IGSF8Q969P0 613 aa3.54□□□□□ -1.84
CNOT2-216ENST00000548939 ZBTB10Q96DT7 871 aa3.54□□□□□ -1.84
CNOT2-216ENST00000548939 GMPPAQ96IJ6 420 aaPredicted RBP3.54□□□□□ -1.84
CNOT2-216ENST00000548939 PRMT6Q96LA8 375 aaPredicted RBP3.54□□□□□ -1.84
CNOT2-216ENST00000548939 GPR63Q9BZJ6 419 aa3.54□□□□□ -1.84
CNOT2-216ENST00000548939 SLC28A3Q9HAS3 691 aa3.54□□□□□ -1.84
CNOT2-216ENST00000548939 APOBEC3GQ9HC16 384 aaKnown RBP3.54□□□□□ -1.84
CNOT2-216ENST00000548939 SLC38A7Q9NVC3 462 aa3.54□□□□□ -1.84
CNOT2-216ENST00000548939 ATAD3AQ9NVI7 634 aa3.54□□□□□ -1.84
CNOT2-216ENST00000548939 EXOGQ9Y2C4 368 aaKnown RBP3.54□□□□□ -1.84
CNOT2-216ENST00000548939 USP16Q9Y5T5 823 aa3.54□□□□□ -1.84
CNOT2-216ENST00000548939 FLT1P17948 1338 aa3.53□□□□□ -1.84
CNOT2-216ENST00000548939 ALPK3Q96L96 1907 aa3.53□□□□□ -1.84
CNOT2-216ENST00000548939 PLOD2O00469 737 aa3.53□□□□□ -1.84
CNOT2-216ENST00000548939 TSPAN4O14817 238 aa3.53□□□□□ -1.84
CNOT2-216ENST00000548939 CLPTM1O96005 669 aa3.53□□□□□ -1.84
CNOT2-216ENST00000548939 GATA1P15976 413 aaPredicted RBP3.53□□□□□ -1.84
CNOT2-216ENST00000548939 RPP30P78346 268 aaKnown RBP3.53□□□□□ -1.84
CNOT2-216ENST00000548939 GRAPQ13588 217 aa3.53□□□□□ -1.84
CNOT2-216ENST00000548939 ADAMTSL4-AS1Q5T5F5 129 aa3.53□□□□□ -1.84
CNOT2-216ENST00000548939 C10orf62Q5T681 223 aaPredicted RBP3.53□□□□□ -1.84
CNOT2-216ENST00000548939 SUSD4Q5VX71 490 aa3.53□□□□□ -1.84
CNOT2-216ENST00000548939 KIF6Q6ZMV9 814 aa3.53□□□□□ -1.84
CNOT2-216ENST00000548939 Q75L30 129 aa3.53□□□□□ -1.84
CNOT2-216ENST00000548939 PPP1R42Q7Z4L9 355 aa3.53□□□□□ -1.84
CNOT2-216ENST00000548939 APOBEC3FQ8IUX4 373 aaKnown RBP3.53□□□□□ -1.84
CNOT2-216ENST00000548939 GRHL3Q8TE85 626 aa3.53□□□□□ -1.84
CNOT2-216ENST00000548939 RRNAD1Q96FB5 475 aaKnown RBP3.53□□□□□ -1.84
CNOT2-216ENST00000548939 C18orf12Q96KH6 178 aa3.53□□□□□ -1.84
CNOT2-216ENST00000548939 DEFB129Q9H1M3 183 aa3.53□□□□□ -1.84
CNOT2-216ENST00000548939 KIF9Q9HAQ2 790 aa3.53□□□□□ -1.84
CNOT2-216ENST00000548939 SIX2Q9NPC8 291 aa3.53□□□□□ -1.84
CNOT2-216ENST00000548939 ASAH2Q9NR71 780 aa3.53□□□□□ -1.84
CNOT2-216ENST00000548939 KCND2Q9NZV8 630 aa3.53□□□□□ -1.84
CNOT2-216ENST00000548939 KLHL8Q9P2G9 620 aaPredicted RBP3.53□□□□□ -1.84
CNOT2-216ENST00000548939 POLLQ9UGP5 575 aa3.53□□□□□ -1.84
CNOT2-216ENST00000548939 ZNF646O15015 1829 aaPredicted RBP3.53□□□□□ -1.84
CNOT2-216ENST00000548939 SPTBN4Q9H254 2564 aa3.53□□□□□ -1.85
CNOT2-216ENST00000548939 CFAP54Q96N23 3096 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 UBN2Q6ZU65 1347 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 MAGEB17A8MXT2 336 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 SLC22A2O15244 555 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 NBNO60934 754 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 UFL1O94874 794 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 MLYCDO95822 493 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 EML2O95834 649 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 KRT19P08727 400 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 HMOX1P09601 288 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 MYL6BP14649 208 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 ITGA3P26006 1051 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 DCTN2Q13561 401 aaKnown RBP3.52□□□□□ -1.85
CNOT2-216ENST00000548939 SHHQ15465 462 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 GSTA3Q16772 222 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 UGP2Q16851 508 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 DUOXA1Q1HG43 343 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 BSPRYQ5W0U4 402 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 BHLHB9Q6PI77 547 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 ATG9AQ7Z3C6 839 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 GBGT1Q8N5D6 347 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 NKAPQ8N5F7 415 aaKnown RBP3.52□□□□□ -1.85
CNOT2-216ENST00000548939 BMPERQ8N8U9 685 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 AMER3Q8N944 861 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 OR14L1PQ8NHC6 308 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 MRGPRDQ8TDS7 321 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 TRIM63Q969Q1 353 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 UTP14AQ9BVJ6 771 aaKnown RBP3.52□□□□□ -1.85
CNOT2-216ENST00000548939 MXD3Q9BW11 206 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 SIL1Q9H173 461 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 BRF2Q9HAW0 419 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 TMEM181Q9P2C4 612 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 OR14J1Q9UGF5 321 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 HAO1Q9UJM8 370 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 ZHX2Q9Y6X8 837 aa3.52□□□□□ -1.85
CNOT2-216ENST00000548939 WDFY4Q6ZS81 3184 aa3.51□□□□□ -1.85
CNOT2-216ENST00000548939 USP34Q70CQ2 3546 aa3.51□□□□□ -1.85
CNOT2-216ENST00000548939 MYO9BQ13459 2157 aa3.51□□□□□ -1.85
CNOT2-216ENST00000548939 FAM237AA0A1B0GTK4 181 aa3.51□□□□□ -1.85
CNOT2-216ENST00000548939 A0A1W2PNU3 283 aaPredicted RBP3.51□□□□□ -1.85
CNOT2-216ENST00000548939 A0A1W2PQM1 296 aa3.51□□□□□ -1.85
CNOT2-216ENST00000548939 CLRN2A0PK11 232 aa3.51□□□□□ -1.85
CNOT2-216ENST00000548939 LIPFP07098 398 aa3.51□□□□□ -1.85
CNOT2-216ENST00000548939 HMBSP08397 361 aa3.51□□□□□ -1.85
CNOT2-216ENST00000548939 LIFP15018 202 aa3.51□□□□□ -1.85
CNOT2-216ENST00000548939 IL7RP16871 459 aa3.51□□□□□ -1.85
CNOT2-216ENST00000548939 ZNF182P17025 639 aaPredicted RBP3.51□□□□□ -1.85
CNOT2-216ENST00000548939 CPOXP36551 454 aa3.51□□□□□ -1.85
CNOT2-216ENST00000548939 KRTAP12-2P59991 146 aa3.51□□□□□ -1.85
CNOT2-216ENST00000548939 SNRPD1P62314 119 aaKnown RBP3.51□□□□□ -1.85
CNOT2-216ENST00000548939 PPARDQ03181 441 aa3.51□□□□□ -1.85
CNOT2-216ENST00000548939 NEXNQ0ZGT2 675 aa3.51□□□□□ -1.85
CNOT2-216ENST00000548939 TBX2Q13207 712 aaPredicted RBP3.51□□□□□ -1.85
CNOT2-216ENST00000548939 MTHFSDQ2M296 383 aaKnown RBP3.51□□□□□ -1.85
CNOT2-216ENST00000548939 KRTAP13-3Q3SY46 172 aa3.51□□□□□ -1.85
CNOT2-216ENST00000548939 ZNF613Q6PF04 617 aa3.51□□□□□ -1.85
CNOT2-216ENST00000548939 TBC1D16Q8TBP0 767 aa3.51□□□□□ -1.85
CNOT2-216ENST00000548939 PPP4R1Q8TF05 950 aa3.51□□□□□ -1.85
CNOT2-216ENST00000548939 APOPT1Q96IL0 206 aa3.51□□□□□ -1.85
CNOT2-216ENST00000548939 SMC6Q96SB8 1091 aa3.51□□□□□ -1.85
CNOT2-216ENST00000548939 RHNO1Q9BSD3 238 aa3.51□□□□□ -1.85
CNOT2-216ENST00000548939 POLR3GLQ9BT43 218 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms