RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 VNN3Q9NY84 501 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 KLQ9UEF7 1012 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 TMEFF2Q9UIK5 374 aaPredicted RBP13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 VWA8A3KMH1 1905 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 CLDN25C9JDP6 229 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 NDUFS2O75306 463 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 PARNO95453 639 aaKnown RBP13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 OTCP00480 354 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 HPCAL1P37235 193 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 IFITM3Q01628 133 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 PCBP2Q15366 365 aaKnown RBP eCLIP13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 ZNF691Q5VV52 312 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 SUSD1Q6UWL2 747 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 NCCRP1Q6ZVX7 275 aaPredicted RBP13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 ANKRD46Q86W74 232 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 CLDN19Q8N6F1 224 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 LKAAEAR1Q8TD35 194 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 EID2BQ96D98 161 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 RDH12Q96NR8 316 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 ZBTB18Q99592 522 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 DPY30Q9C005 99 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 MAGEH1Q9H213 219 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 IL37Q9NZH6 218 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 ERVK-18Q9QC07 812 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 MTRRQ9UBK8 725 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 VPS9D1Q9Y2B5 631 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 SH3BP1Q9Y3L3 701 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 PCDHGA4Q9Y5G9 962 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 LAMA3Q16787 3333 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 H3BNC9 293 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 AREL1O15033 823 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 UGT2B11O75310 529 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 DUSP11O75319 330 aaKnown RBP13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 SEC22BO75396 215 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 CREG1O75629 220 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 MYCLP1P12525 358 aaPredicted RBP13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 CTPS1P17812 591 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 GABARAPL2P60520 117 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 OCA2Q04671 838 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 TWF1Q12792 350 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 TRIM32Q13049 653 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 SIM2Q14190 667 aaPredicted RBP13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 PHKG1Q16816 387 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 C16orf59Q7L2K0 433 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 DCP2Q8IU60 420 aaKnown RBP13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 EID3Q8N140 333 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 SVOPLQ8N434 492 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 FAR1Q8WVX9 515 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 OR52E6Q96RD3 313 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 CIPCQ9C0C6 399 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 OLA1Q9NTK5 396 aaKnown RBP13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 USE1Q9NZ43 259 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 EIF3LQ9Y262 564 aaKnown RBP13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 B3GNT3Q9Y2A9 372 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 PCDHB14Q9Y5E9 798 aa13.86□□□□□ -0.19
RAPGEF3-218ENST00000548919 PLXNA4Q9HCM2 1894 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 TRIM43BA6NCK2 446 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 ZNF99A8MXY4 864 aaPredicted RBP13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 SCAMP3O14828 347 aaKnown RBP13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 C1QCP02747 245 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 ESR1P03372 595 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 S100BP04271 92 aaPredicted RBP13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 HALP42357 657 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 KPNA1P52294 538 aaPredicted RBP13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 VBP1P61758 197 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 FPGSQ05932 587 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 CDK5R2Q13319 367 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 DGCR6Q14129 220 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 ADPRMQ3LIE5 342 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 FAM171A1Q5VUB5 890 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 TMEM236Q5W0B7 351 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 LAIR1Q6GTX8 287 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 GLB1LQ6UWU2 654 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 RSPO2Q6UXX9 243 aaPredicted RBP13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 MBOAT1Q6ZNC8 495 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 RTN4RL1Q86UN2 441 aaPredicted RBP13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 DENND1CQ8IV53 801 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 MICU2Q8IYU8 434 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 AADATQ8N5Z0 425 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 MCOLN3Q8TDD5 553 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 PPP3R2Q96LZ3 170 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 EGFL8Q99944 293 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 MYOCQ99972 504 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 P2RY12Q9H244 342 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 TRMT13Q9NUP7 481 aaKnown RBP13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 DCAF13Q9NV06 445 aaKnown RBP13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 TMEM45AQ9NWC5 275 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 C3orf18Q9UK00 162 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 BCKDKO14874 412 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 KDELR3O43731 214 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 F11P03951 625 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 ITIH1P19827 911 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 PTGER3P43115 390 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 PHC1P78364 1004 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 IRF5Q13568 498 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 DNASE1L3Q13609 305 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 RUNDC3AQ59EK9 446 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 CCDC81Q6ZN84 652 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 ANKRD13BQ86YJ7 626 aa13.85□□□□□ -0.19
RAPGEF3-218ENST00000548919 ADHFE1Q8IWW8 467 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms