RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 EMX2Q04743 252 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 RCAN2Q14206 197 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 COQ5Q5HYK3 327 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 ZNF765Q7L2R6 523 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 NLRP8Q86W28 1048 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 MMAAQ8IVH4 418 aaKnown RBP20.46■□□□□ 0.87
RITA1-201ENST00000548278 YAF2Q8IY57 180 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 KXD1Q9BQD3 176 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 GPATCH1Q9BRR8 931 aaKnown RBP20.46■□□□□ 0.87
RITA1-201ENST00000548278 PRSS16Q9NQE7 514 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 ZIM2Q9NZV7 527 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 FFAR3O14843 346 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 ANGPT2O15123 496 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 GPR42O15529 346 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 ATG13O75143 517 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 SLC22A3O75751 556 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 C6P13671 934 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 PSMC3P17980 439 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 AP1S2P56377 157 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 NR6A1Q15406 480 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 TAF11Q15544 211 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 TMEM52BQ4KMG9 183 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 ERN2Q76MJ5 926 aaKnown RBP20.46■□□□□ 0.87
RITA1-201ENST00000548278 FAM156AQ8NDB6 213 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 MCOLN3Q8TDD5 553 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 SPDL1Q96EA4 605 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 SLC39A3Q9BRY0 314 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 CCM2Q9BSQ5 444 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 MRPL40Q9NQ50 206 aaKnown RBP20.46■□□□□ 0.87
RITA1-201ENST00000548278 TMEM45AQ9NWC5 275 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 CD300AQ9UGN4 299 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 MCM8Q9UJA3 840 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 K7ESM1 405 aa20.45■□□□□ 0.86
RITA1-201ENST00000548278 MMP20O60882 483 aa20.45■□□□□ 0.86
RITA1-201ENST00000548278 EGFLAMQ63HQ2 1017 aa20.45■□□□□ 0.86
RITA1-201ENST00000548278 TMEM220Q6QAJ8 160 aa20.45■□□□□ 0.86
RITA1-201ENST00000548278 DNAJC9Q8WXX5 260 aa20.45■□□□□ 0.86
RITA1-201ENST00000548278 NUS1Q96E22 293 aa20.45■□□□□ 0.86
RITA1-201ENST00000548278 LRCH3Q96II8 777 aa20.45■□□□□ 0.86
RITA1-201ENST00000548278 DYRK4Q9NR20 520 aa20.45■□□□□ 0.86
RITA1-201ENST00000548278 SUCOQ9UBS9 1254 aaKnown RBP20.45■□□□□ 0.86
RITA1-201ENST00000548278 KLQ9UEF7 1012 aa20.45■□□□□ 0.86
RITA1-201ENST00000548278 ZFC3H1O60293 1989 aaKnown RBP20.44■□□□□ 0.86
RITA1-201ENST00000548278 A0A1W2PP18 115 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 SLC5A10A0PJK1 596 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 PRORSD1PA6NEY8 169 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 MANBAO00462 879 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 CLDN9O95484 217 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 EPHX1P07099 455 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 RPSAP08865 295 aaKnown RBP20.44■□□□□ 0.86
RITA1-201ENST00000548278 GSTM1P09488 218 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 TCN1P20061 433 aaPredicted RBP20.44■□□□□ 0.86
RITA1-201ENST00000548278 EIF2DP41214 584 aaKnown RBP20.44■□□□□ 0.86
RITA1-201ENST00000548278 GSTM4Q03013 218 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 MUM1Q2TAK8 710 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 AP5B1Q2VPB7 878 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 PTCHD3Q3KNS1 767 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 TRIM46Q7Z4K8 759 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 DSG4Q86SJ6 1040 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 DHDDSQ86SQ9 333 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 GLMNQ92990 594 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 ASB9Q96DX5 294 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 SLC29A3Q9BZD2 475 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 EPHX3Q9H6B9 360 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 FARSBQ9NSD9 589 aaKnown RBP20.44■□□□□ 0.86
RITA1-201ENST00000548278 FAM8A1Q9UBU6 413 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 BCAP29Q9UHQ4 241 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 KRT87PA6NCN2 255 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 ASPDHA6ND91 283 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 FXYD1O00168 92 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 MAP3K7O43318 606 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 ULK1O75385 1050 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 PSIP1O75475 530 aaKnown RBP20.44■□□□□ 0.86
RITA1-201ENST00000548278 ZNF658BQ4V348 819 aaPredicted RBP20.44■□□□□ 0.86
RITA1-201ENST00000548278 SYTL3Q4VX76 610 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 ATAT1Q5SQI0 421 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 PARM1Q6UWI2 310 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 LILRA3Q8N6C8 439 aaPredicted RBP20.44■□□□□ 0.86
RITA1-201ENST00000548278 BHLHE22Q8NFJ8 381 aaPredicted RBP20.44■□□□□ 0.86
RITA1-201ENST00000548278 PROKR1Q8TCW9 393 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 USP7Q93009 1102 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 TMEM159Q96B96 161 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 ELSPBP1Q96BH3 223 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 ERLEC1Q96DZ1 483 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 PPP3R2Q96LZ3 170 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 HOPXQ9BPY8 73 aaPredicted RBP20.44■□□□□ 0.86
RITA1-201ENST00000548278 HDAC8Q9BY41 377 aa20.44■□□□□ 0.86
RITA1-201ENST00000548278 PABPN1LA6NDY0 278 aaKnown RBP20.43■□□□□ 0.86
RITA1-201ENST00000548278 C1QTNF3-AMACRE9PGA6 284 aa20.43■□□□□ 0.86
RITA1-201ENST00000548278 SLC28A1O00337 649 aa20.43■□□□□ 0.86
RITA1-201ENST00000548278 IL12AP29459 219 aa20.43■□□□□ 0.86
RITA1-201ENST00000548278 P2RY2P41231 377 aa20.43■□□□□ 0.86
RITA1-201ENST00000548278 GRIA2P42262 883 aa20.43■□□□□ 0.86
RITA1-201ENST00000548278 PREPP48147 710 aa20.43■□□□□ 0.86
RITA1-201ENST00000548278 POLR2JP52435 117 aaKnown RBP20.43■□□□□ 0.86
RITA1-201ENST00000548278 SLC7A2P52569 658 aa20.43■□□□□ 0.86
RITA1-201ENST00000548278 KCNK10P57789 538 aa20.43■□□□□ 0.86
RITA1-201ENST00000548278 DPTQ07507 201 aa20.43■□□□□ 0.86
RITA1-201ENST00000548278 ABRQ12979 859 aa20.43■□□□□ 0.86
RITA1-201ENST00000548278 TRIM25Q14258 630 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms